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Solving inverse problems in cardiovascular modeling is particularly challenging due to the high computational cost of running high-fidelity simulations. In this work, we focus on Bayesian parameter estimation and explore different methods…

Machine Learning · Statistics 2025-12-22 Chloe H. Choi , Andrea Zanoni , Daniele E. Schiavazzi , Alison L. Marsden

This paper deals with the development of a Reduced-Order Model (ROM) to investigate haemodynamics in cardiovascular applications. It employs the use of Proper Orthogonal Decomposition (POD) for the computation of the basis functions and the…

Numerical Analysis · Mathematics 2025-01-24 Pierfrancesco Siena , Pasquale Claudio Africa , Michele Girfoglio , Gianluigi Rozza

In this paper we consider the monodomain model of cardiac electrophysiology. After an analysis of the well-posedness of the model, we determine an asymptotic expansion of the perturbed potential due to the presence of small conductivity…

Analysis of PDEs · Mathematics 2020-10-28 Elena Beretta , Cecilia Cavaterra , Luca Ratti

This work is dedicated to the simulation of full cycles of the electrical activity of the heart and the corresponding body surface potential. The model is based on a realistic torso and heart anatomy, including ventricles and atria. One of…

Medical Physics · Physics 2015-09-04 Elisa Schenone , Annabelle Collin , Jean-Frédéric Gerbeau

In the framework of accurate and efficient segregated schemes for 3D cardiac electromechanics and 0D cardiovascular models, we propose here a novel numerical approach to address the coupled 3D-0D problem introduced in Part I of this…

In this study we present a novel computational model for unprecedented simulations of the whole cardiac electrophysiology. According to the heterogeneous electrophysiologic properties of the heart, the whole cardiac geometry is decomposed…

Medical Physics · Physics 2022-03-14 Giulio Del Corso , Roberto Verzicco , Francesco Viola

We study a conservative 5-point cell-centered finite volume discretization of the high-contrast diffusion equation. We aim to construct preconditioners that are robust with respect to the magnitude of the coefficient contrast and the mesh…

Numerical Analysis · Mathematics 2009-04-14 Burak Aksoylu , Zuhal Yeter

We present a simulation workflow for efficient investigations of the interplay between 3D lithium-ion electrode microstructures and electrochemical performance, with emphasis on lithium plating. Our approach addresses several challenges.…

In this paper we propose a novel coupled poroelasticity-diffusion model for the formation of extracellular oedema and infectious myocarditis valid in large deformations, manifested as an interaction between interstitial flow and the…

In this work we are concerned with the inverse problem of the estimation of modeling parameters for a reactive bimolecular transport based on experimental data that is non-uniformly distributed along the interval where the process takes…

Fluid Dynamics · Physics 2015-09-24 Daniel A. Cuch , Diana Rubio , Claudio D. El Hasi

The human heart is enclosed in the pericardial cavity. The pericardium consists of a layered thin sac and is separated from the myocardium by a thin film of fluid. It provides a fixture in space and frictionless sliding of the myocardium.…

Computational Engineering, Finance, and Science · Computer Science 2018-12-11 Martin R. Pfaller , Julia M. Hörmann , Martina Weigl , Andreas Nagler , Radomir Chabiniok , Cristóbal Bertoglio , Wolfgang A. Wall

Precision cardiology based on cardiac digital twins requires accurate simulations of cardiac arrhythmias. However, detailed models, such as the monodomain model, are computationally costly and have limited applicability in practice. Thus,…

Computational Engineering, Finance, and Science · Computer Science 2024-10-31 Lia Gander , Rolf Krause , Francisco Sahli Costabal , Simone Pezzuto

In the context of micro-circulation, the coexistence of two distinct length scales - the vascular radius and the tissue/organ scale - with a substantial difference in magnitude, poses significant challenges. To handle slender inclusions and…

Numerical Analysis · Mathematics 2023-07-18 Nunzio Dimola , Miroslav Kuchta , Kent-Andre Mardal , Paolo Zunino

This paper presents a scalable physics-based block preconditioner for mixed-dimensional models in beam-solid interaction and their application in engineering. In particular, it studies the linear systems arising from a regularized…

Computational Engineering, Finance, and Science · Computer Science 2024-08-09 Max Firmbach , Ivo Steinbrecher , Alexander Popp , Matthias Mayr

In this paper, we are interested in an efficient numerical method for the mixed-dimensional approach to modeling single-phase flow in fractured porous media. The model introduces fractures and their intersections as lower-dimensional…

Numerical Analysis · Mathematics 2019-06-03 Ana Budiša , Xiaozhe Hu

We consider the finite element discretization and the iterative solution of singularly perturbed elliptic reaction-diffusion equations in three-dimensional computational domains. These equations arise from the optimality conditions for…

Numerical Analysis · Mathematics 2021-02-09 Ulrich Langer , Olaf Steinbach , Huidong Yang

In this talk I discuss the general question of the portability of Molecular Dynamics codes for diffusive systems on parallel computers of the APE family. The intrinsic single precision arithmetics of the today available APE platforms does…

Biological Physics · Physics 2009-10-30 G. La Penna , S. Letardi , V. Minicozzi , S. Morante , G. C. Rossi , G. Salina

We present a Calder\'on preconditioning scheme for the symmetric formulation of the forward electroencephalographic (EEG) problem that cures both the dense discretization and the high-contrast breakdown. Unlike existing Calder\'on schemes…

Numerical Analysis · Mathematics 2023-08-16 Viviana Giunzioni , John E. Ortiz G. , Adrien Merlini , Simon B. Adrian , Francesco P. Andriulli

This work proposes a stabilized space--time method for the monodomain equation coupled with the Rogers--McCulloch ionic model, which is widely used to simulate electrophysiological wave propagation in the cardiac tissue. By extending the…

Numerical Analysis · Mathematics 2025-03-18 P. F. Antonietti , L. Dedè , G. Loli , M. Montardini , G. Sangalli , P. Tesini

We discuss the construction of robust preconditioners for finite element approximations of Biot's consolidation model in poroelasticity. More precisely, we study finite element methods based on generalizations of the Hellinger-Reissner…

Numerical Analysis · Mathematics 2017-03-24 Trygve Baerland , Jeonghun J. Lee , Kent-Andre Mardal , Ragnar Winther