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Recent approaches based on artificial neural networks (ANNs) have shown promising results for named-entity recognition (NER). In order to achieve high performances, ANNs need to be trained on a large labeled dataset. However, labels might…

Computation and Language · Computer Science 2017-05-18 Ji Young Lee , Franck Dernoncourt , Peter Szolovits

Natural language tasks like Named Entity Recognition (NER) in the clinical domain on non-English texts can be very time-consuming and expensive due to the lack of annotated data. Cross-lingual transfer (CLT) is a way to circumvent this…

Computation and Language · Computer Science 2023-06-08 Xavier Fontaine , Félix Gaschi , Parisa Rastin , Yannick Toussaint

Background and Objective: Biomedical Named Entity Recognition (BioNER) is a foundational task in medical informatics, crucial for downstream applications like drug discovery and clinical trial matching. However, adapting general-domain…

Computation and Language · Computer Science 2025-12-30 Jian Chen , Leilei Su , Cong Sun

Clinical Named Entity Recognition (CNER) aims to identify and classify clinical terms such as diseases, symptoms, treatments, exams, and body parts in electronic health records, which is a fundamental and crucial task for clinical and…

Computation and Language · Computer Science 2018-04-16 Qi Wang , Yuhang Xia , Yangming Zhou , Tong Ruan , Daqi Gao , Ping He

The Bidirectional long short-term memory networks (BiLSTM) have been widely used as an encoder in models solving the named entity recognition (NER) task. Recently, the Transformer is broadly adopted in various Natural Language Processing…

Computation and Language · Computer Science 2019-12-11 Hang Yan , Bocao Deng , Xiaonan Li , Xipeng Qiu

For languages with no annotated resources, transferring knowledge from rich-resource languages is an effective solution for named entity recognition (NER). While all existing methods directly transfer from source-learned model to a target…

Computation and Language · Computer Science 2020-07-16 Qianhui Wu , Zijia Lin , Guoxin Wang , Hui Chen , Börje F. Karlsson , Biqing Huang , Chin-Yew Lin

Biomedical named entity recognition (NER) is a critial task that aims to identify structured information in clinical text, which is often replete with complex, technical terms and a high degree of variability. Accurate and reliable NER can…

Computation and Language · Computer Science 2023-05-30 Zhiyi Li , Shengjie Zhang , Yujie Song , Jungyeul Park

Exploring the application of powerful large language models (LLMs) on the named entity recognition (NER) task has drawn much attention recently. This work pushes the performance boundary of zero-shot NER with LLMs by proposing a…

Computation and Language · Computer Science 2024-03-22 Tingyu Xie , Qi Li , Yan Zhang , Zuozhu Liu , Hongwei Wang

Injecting external domain-specific knowledge (e.g., UMLS) into pretrained language models (LMs) advances their capability to handle specialised in-domain tasks such as biomedical entity linking (BEL). However, such abundant expert knowledge…

Computation and Language · Computer Science 2021-06-01 Fangyu Liu , Ivan Vulić , Anna Korhonen , Nigel Collier

Recognizing spans of biomedical concepts and their types (e.g., drug or gene) in free text, often called biomedical named entity recognition (NER), is a basic component of information extraction (IE) pipelines. Without a strong NER…

Computation and Language · Computer Science 2025-04-02 Motasem S Obeidat , Md Sultan Al Nahian , Ramakanth Kavuluru

Lately, instruction-based techniques have made significant strides in improving performance in few-shot learning scenarios. They achieve this by bridging the gap between pre-trained language models and fine-tuning for specific downstream…

Information Retrieval · Computer Science 2024-01-25 Hiranmai Sri Adibhatla , Pavan Baswani , Manish Shrivastava

Named Entity Recognition is one of the most important text processing requirement in many NLP tasks. In this paper we use a deep architecture to accomplish the task of recognizing named entities in a given Hindi text sentence. Bidirectional…

Computation and Language · Computer Science 2019-11-06 Bansi Shah , Sunil Kumar Kopparapu

For named entity recognition (NER), bidirectional recurrent neural networks became the state-of-the-art technology in recent years. Competing approaches vary with respect to pre-trained word embeddings as well as models for character…

Computation and Language · Computer Science 2018-11-08 Gregor Wiedemann , Raghav Jindal , Chris Biemann

The massive scale and growth of textual biomedical data have made its indexing and classification increasingly important. However, existing research on this topic mainly utilized convolutional and recurrent neural networks, which generally…

Computation and Language · Computer Science 2022-03-08 Bruce Nguyen , Shaoxiong Ji

Clinical text is rich in information, with mentions of treatment, medication and anatomy among many other clinical terms. Multiple terms can refer to the same core concepts which can be referred as a clinical entity. Ontologies like the…

Computation and Language · Computer Science 2024-05-28 Akshit Achara , Sanand Sasidharan , Gagan N

Developing high-performing systems for detecting biomedical named entities has major implications. State-of-the-art deep-learning based solutions for entity recognition often require large annotated datasets, which is not available in the…

Computation and Language · Computer Science 2020-11-03 Arda Akdemir , Tetsuo Shibuya

Named Entity Recognition (NER) is essential in various Natural Language Processing (NLP) applications. Traditional NER models are effective but limited to a set of predefined entity types. In contrast, Large Language Models (LLMs) can…

Computation and Language · Computer Science 2023-11-16 Urchade Zaratiana , Nadi Tomeh , Pierre Holat , Thierry Charnois

Weak supervision has shown promising results in many natural language processing tasks, such as Named Entity Recognition (NER). Existing work mainly focuses on learning deep NER models only with weak supervision, i.e., without any human…

Computation and Language · Computer Science 2021-08-03 Haoming Jiang , Danqing Zhang , Tianyu Cao , Bing Yin , Tuo Zhao

To better tackle the named entity recognition (NER) problem on languages with little/no labeled data, cross-lingual NER must effectively leverage knowledge learned from source languages with rich labeled data. Previous works on…

Computation and Language · Computer Science 2020-07-16 Qianhui Wu , Zijia Lin , Börje F. Karlsson , Jian-Guang Lou , Biqing Huang

Named entity recognition (NER) models are typically based on the architecture of Bi-directional LSTM (BiLSTM). The constraints of sequential nature and the modeling of single input prevent the full utilization of global information from…

Computation and Language · Computer Science 2019-11-20 Ying Luo , Fengshun Xiao , Hai Zhao