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The paper demonstrates the optimization of the execution environment of a hybrid OpenMP+MPI computational fluid dynamics code (shallow water equation solver) on a cluster enabled with Intel Xeon Phi coprocessors. The discussion includes:…

Mathematical Software · Computer Science 2014-08-11 Andrey Vladimirov , Cliff Addison

We describe a strategy for code modernisation of Gadget, a widely used community code for computational astrophysics. The focus of this work is on node-level performance optimisation, targeting current multi/many-core IntelR architectures.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-27 Fabio Baruffa , Luigi Iapichino , Nicolay J. Hammer , Vasileios Karakasis

Manycores are consolidating in HPC community as a way of improving performance while keeping power efficiency. Knights Landing is the recently released second generation of Intel Xeon Phi architecture. While optimizing applications on CPUs,…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-06 Enzo Rucci , Armando De Giusti , Marcelo Naiouf

Comprehending the performance bottlenecks at the core of the intricate hardware-software interactions exhibited by highly parallel programs on HPC clusters is crucial. This paper sheds light on the issue of automatically asynchronous MPI…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-06 Ayesha Afzal , Georg Hager , Stefano Markidis , Gerhard Wellein

The introduction of Intel(R) Xeon Phi(TM) coprocessors opened up new possibilities in development of highly parallel applications. The familiarity and flexibility of the architecture together with compiler support integrated into the Intel…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-11-26 Jiri Dokulil , Enes Bajrovic , Siegfried Benkner , Sabri Pllana , Martin Sandrieser , Beverly Bachmayer

With recent developments in parallel supercomputing architecture, many core, multi-core, and GPU processors are now commonplace, resulting in more levels of parallelism, memory hierarchy, and programming complexity. It has been necessary to…

High Energy Physics - Lattice · Physics 2017-12-04 Ruizi Li , Carleton DeTar , Steven Gottlieb , Doug Toussaint

With the ease-of-programming, flexibility and yet efficiency, MapReduce has become one of the most popular frameworks for building big-data applications. MapReduce was originally designed for distributed-computing, and has been extended to…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-09-03 Mian Lu , Lei Zhang , Huynh Phung Huynh , Zhongliang Ong , Yun Liang , Bingsheng He , Rick Siow Mong Goh , Richard Huynh

Today, one of the main challenges for high-performance computing systems is to improve their performance by keeping energy consumption at acceptable levels. In this context, a consolidated strategy consists of using accelerators such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-18 Manuel Costanzo , Enzo Rucci , Ulises Costi , Franco Chichizola , Marcelo Naiouf

Intel Xeon Phi many-integrated-core (MIC) architectures usher in a new era of terascale integration. Among emerging killer applications, parallel graph processing has been a critical technique to analyze connected data. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-02-26 Lei Jiang , Langshi Chen , Judy Qiu

Many-core accelerators, as represented by the XeonPhi coprocessors and GPGPUs, allow software to exploit spatial and temporal sharing of computing resources to improve the overall system performance. To unlock this performance potential…

Performance · Computer Science 2018-02-09 Peng Zhang , Jianbin Fang , Tao Tang , Canqun Yang , Zheng Wang

Three dimensional particle-in-cell laser-plasma simulation is an important area of computational physics. Solving state-of-the-art problems requires large-scale simulation on a supercomputer using specialized codes. A growing demand in…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-04 Igor Surmin , Sergey Bastrakov , Zakhar Matveev , Evgeny Efimenko , Arkady Gonoskov , Iosif Meyerov

Co-expression network is a critical technique for the identification of inter-gene interactions, which usually relies on all-pairs correlation (or similar measure) computation between gene expression profiles across multiple samples.…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-09-28 Yongchao Liu , Tony Pan , Srinivas Aluru

We examine the Xeon Phi, which is based on Intel's Many Integrated Cores architecture, for its suitability to run the FDK algorithm--the most commonly used algorithm to perform the 3D image reconstruction in cone-beam computed tomography.…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-01-16 Johannes Hofmann , Jan Treibig , Georg Hager , Gerhard Wellein

The Crossroads supercomputer was designed to simulate some of the most complex physical devices in the world. These simulations routinely require 1/2 petabyte or more of system memory running on thousands of compute nodes for months at a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-11-11 Galen M. Shipman , Sriram Swaminarayan , Gary Grider , Jim Lujan , R. Joseph Zerr

In 2013 Intel introduced the Xeon Phi, a new parallel co-processor board. The Xeon Phi is a cache-coherent many-core shared memory architecture claiming CPU-like versatility, programmability, high performance, and power efficiency. The…

Performance · Computer Science 2014-11-10 S. Ali Mirsoleimani , Aske Plaat , Jos Vermaseren , Jaap van den Herik

Large language models (LLMs) hold tremendous potential for addressing numerous real-world challenges, yet they typically demand significant computational resources and memory. Deploying LLMs onto a resource-limited hardware device with…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-02 Pujiang He , Shan Zhou , Changqing Li , Wenhuan Huang , Weifei Yu , Duyi Wang , Chen Meng , Sheng Gui

This article presents an automatic approach to quickly derive a good solution for hardware resource partition and task granularity for task-based parallel applications on heterogeneous many-core architectures. Our approach employs a…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-10 Peng Zhang , Jianbin Fang , Canqun Yang , Chun Huang , Tao Tang , Zheng Wang

Energy consumption is increasingly becoming a limiting factor to the design of faster large-scale parallel systems, and development of energy-efficient and energy-aware applications is today a relevant issue for HPC code-developer…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-06 E. Calore , A. Gabbana , S. F. Schifano , R. Tripiccione

We evaluate the second-generation Intel Xeon Phi coprocessor based on the Intel Many Integrated Core (MIC) architecture, aka the Knights Landing or KNL, for simulating neutrino oscillations in (core-collapse) supernovae. For this purpose we…

Computational Physics · Physics 2019-12-24 Vahid Noormofidi , Susan R. Atlas , Huaiyu Duan

Intel Xeon Phi is a recently released high-performance coprocessor which features 61 cores each supporting 4 hardware threads with 512-bit wide SIMD registers achieving a peak theoretical performance of 1Tflop/s in double precision. Many…

Performance · Computer Science 2013-02-06 Erik Saule , Kamer Kaya , Umit V. Catalyurek
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