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Modern software development relies on package ecosystems where a single declared dependency can pull in many additional transitive packages. This dependency amplification, defined as the ratio of transitive to direct dependencies, has major…

Software Engineering · Computer Science 2025-12-18 Jahidul Arafat

In this research, we present a comprehensive, longitudinal empirical summary of the R package ecosystem, including not just CRAN, but also Bioconductor and GitHub. We analyze more than 25,000 packages, 150,000 releases, and 15 million files…

Mathematical Software · Computer Science 2021-02-22 Ethan Bommarito , Michael J Bommarito

One of the biggest strength of many modern programming languages is their rich open source package ecosystem. Indeed, modern language-specific package managers have made it much easier to share reusable code and depend on components written…

Software Engineering · Computer Science 2020-04-08 Théo Zimmermann

Relying on dependency packages accelerates software development, but it also increases the exposure to security vulnerabilities that may be present in dependencies. While developers have full control over which dependency packages (and…

Software Engineering · Computer Science 2023-10-13 Abbas Javan Jafari , Diego Elias Costa , Ahmad Abdellatif , Emad Shihab

The R package ecosystem is expanding fast and dependencies among packages in the ecosystem are becoming more complex. In this study, we explored the package dependencies from a new aspect. We applied a new metric named "dependency…

Software Engineering · Computer Science 2023-01-09 Zuguang Gu

One of the most powerful features of R is its infrastructure for contributed code. The built-in package manager and complementary repositories provide a great system for development and exchange of code, and have played an important role in…

Software Engineering · Computer Science 2013-11-04 Jeroen Ooms

Managing project dependencies is a key maintenance issue in software development. Developers need to choose an update strategy that allows them to receive important updates and fixes while protecting them from breaking changes. Semantic…

Software Engineering · Computer Science 2023-05-26 Abbas Javan Jafari , Diego Elias Costa , Emad Shihab , Rabe Abdalkareem

Software ecosystems (e.g., npm, PyPI) are the backbone of modern software developments. Developers add new packages to ecosystems every day to solve new problems or provide alternative solutions, causing obsolete packages to decline in…

Software Engineering · Computer Science 2023-08-21 Suhaib Mujahid , Diego Elias Costa , Rabe Abdalkareem , Emad Shihab

Modern software systems rely on dependency networks of reusable libraries, where breaking changes propagate and cause downstream consumers to fail. Despite growing research across ecosystems, no comprehensive synthesis exists. We conduct a…

Software Engineering · Computer Science 2026-05-26 Juntao Chen , Tingting Bi , Yanlin Wang , Patanamon Thongtanunam

Much of the success of modern software development can be attributed to code reuse. The ability to reuse existing functionality via third-party dependencies has enabled massive gains in productivity, but for a long time the dominant…

Software Engineering · Computer Science 2025-10-07 Brittany Anne Reid , Raula Gaikovina Kula

Software packages developed and distributed through package managers extensively depend on other packages. These dependencies are regularly updated, for example to add new features, resolve bugs or fix security issues. In order to take full…

Software Engineering · Computer Science 2018-06-14 Alexandre Decan , Tom Mens , Eleni Constantinou

The management of third-party package dependencies is crucial to most technology stacks, with package managers acting as brokers to ensure that a verified package is correctly installed, configured, or removed from an application. Diversity…

Software Engineering · Computer Science 2021-08-16 Syful Islam , Raula Gaikovina Kula , Christoph Treude , Bodin Chinthanet , Takashi Ishio , Kenichi Matsumoto

The increasing interest in open source software has led to the emergence of large language-specific package distributions of reusable software libraries, such as npm and RubyGems. These software packages can be subject to vulnerabilities…

Software Engineering · Computer Science 2022-03-29 Ahmed Zerouali , Tom Mens , Alexandre Decan , Coen De Roover

Software ecosystems can be viewed as socio-technical networks consisting of technical components (software packages) and social components (communities of developers) that maintain the technical components. Ecosystems evolve over time…

Software Engineering · Computer Science 2017-10-16 Eleni Constantinou , Tom Mens

Modern programming languages such as Java, JavaScript, and Rust encourage software reuse by hosting diverse and fast-growing repositories of highly interdependent packages (i.e., reusable libraries) for their users. The standard way to…

Software Engineering · Computer Science 2022-06-01 Joseph Hejderup , Moritz Beller , Konstantinos Triantafyllou , Georgios Gousios

Free and open source software package ecosystems have existed for a long time and are among the most sophisticated human-made systems. One of the oldest and most popular software package ecosystems is CRAN, the repository of packages of the…

Software Engineering · Computer Science 2020-07-16 Marçal Mora-Cantallops , Salvador Sánchez-Alonso , Elena García-Barriocanal

Software ecosystems are collections of projects that are developed and evolve together in the same environment. Existing literature investigates software ecosystems as isolated entities whose boundaries do not overlap and assumes they are…

Software Engineering · Computer Science 2018-12-14 Eleni Constantinou , Alexandre Decan , Tom Mens

The use of third-party packages is becoming increasingly popular and has led to the emergence of large software package ecosystems with a maze of inter-dependencies. Since the reliance on these ecosystems enables developers to reduce…

Software Engineering · Computer Science 2023-06-21 Raula Gaikovina Kula , Katsuro Inoue , Christoph Treude

An Operating System (OS) combines multiple interdependent software packages, which usually have their own independently developed architectures. When a multitude of independent packages are placed together in an OS, an implicit…

Software Engineering · Computer Science 2023-07-11 Victor Prokhorenko , Chadni Islam , Muhammad Ali Babar

An increase in diverse technology stacks and third-party library usage has led developers to inevitably switch technologies. To assist these developers, maintainers have started to release their libraries to multiple technologies, i.e., a…

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