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We investigate the liquid-vapor interface of the restricted primitive model for an ionic fluid using a density functional approach. The applied theory includes the electrostatic contribution to the free energy functional arising from the…

Soft Condensed Matter · Physics 2011-06-17 A. Patrykiejew , S. Sokolowski , O. Pizio

The prediction of protein interactions (CPIs) is crucial for the in-silico screening step in drug discovery. Recently, many end-to-end representation learning methods using deep neural networks have achieved significantly better performance…

Quantitative Methods · Quantitative Biology 2020-11-30 Jingtao Wang , Xi Li , Hua Zhang

Accurate quantification of protein-nanoparticle interactions is essential for applications in nanobiotechnology, nanomedicine, and drug delivery. Motivated by recent computational and experimental work, we combine coarse-grained united-atom…

Bovine heart cytochrome c has been immobilized into the mesoporous silica host material SBA-15 in both its native folded and urea-unfolded state. The comparison of the two folding states' behavior casts doubt on the commonly used…

Biological Physics · Physics 2015-03-11 Sebastian T. Moerz , Patrick Huber

The spatio-temporal organization of proteins and the associated morphological changes in membranes are of importance in cell signaling. Several mechanisms that promote the aggregation of proteins at low cell surface concentrations have been…

Biological Physics · Physics 2018-04-18 K. K. Sreeja , P. B. Sunil Kumar

Photoresponsive surfactants provide a unique microfluidic driving mechanism. Since their molecular shapes change under illumination and thereby affect surface tension of fluid interfaces, Marangoni flow along the interface occurs. To…

Soft Condensed Matter · Physics 2018-11-08 Josua Grawitter , Holger Stark

The adsorption of charged colloids (macroions) onto an oppositely charged planar substrate is investigated theoretically. Taking properly into account the finite size of the macroions, unusual behaviors are reported. It is found that the…

Soft Condensed Matter · Physics 2009-11-13 Rene Messina

An understanding of the CO$_2$ + H$_2$O hydration reaction is crucial for modeling the effects of ocean acidification, for enabling novel carbon storage solutions, and as a model process in the geosciences. While the mechanism of this…

Chemical Physics · Physics 2025-07-08 Samuel G. H. Brookes , Venkat Kapil , Angelos Michaelides , Christoph Schran

Biphasic interfaces are complex but fascinating regimes that display a number of properties distinct from those of the bulk. The CO$_2$-H$_2$O interface, in particular, has been the subject of a number of studies on account of its…

Materials Science · Physics 2025-02-13 Samuel G. H. Brookes , Venkat Kapil , Christoph Schran , Angelos Michaelides

The adsorption of concentrated polydiallyldimethylammonium chloride, PDADMAC-sodium lauryl ether sulfate (SLES) mixtures at the water-vapor interface has been studied by different surface tension techniques and dilational viscoelasticity…

Soft Condensed Matter · Physics 2024-01-30 Andrew Akanno , Eduardo Guzman , Laura Fernandez-Pena , Sara Llamas , Francisco Ortega , Ramon G. Rubio

Ions in water are important in biology, from molecules to organs. Classically, ions in water are treated as ideal noninteracting particles in a perfect gas. Excess free energy of ion was zero. Mathematics was not available to deal…

Biomolecules · Quantitative Biology 2015-06-15 Bob Eisenberg

Ion mobility and ionic conductance in nanodevices are known to deviate from bulk behavior, a phenomenon often attributed to surface effects. We demonstrate that dielectric mismatch between the electrolyte and the surface can qualitatively…

Soft Condensed Matter · Physics 2018-09-17 Hanne S. Antila , Erik Luijten

The most important function of proteins may well be to bind to other biomolecules. It has long been felt that kinetic rates of bond formation and dissociation between soluble receptors and ligands might account for most features of the…

Biological Physics · Physics 2008-09-12 Anne Pierres , Joana Vitte , Anne-Marie Benoliel , Pierre Bongrand

Electrostatic interactions involving proteins depend not just on the ionic charges involved but also on their chemical identities. Here we examine the origins of incompletely understood differences in the strength of association of…

Chemical Physics · Physics 2023-08-15 Chase E. Herman , Arjun Valiya Parambathu , D. N. Asthagiri , Abraham M. Lenhoff

Surface sensitive synchrotron x-ray scattering studies were performed to obtain the distribution of monovalent ions next to a highly charged interface. A lipid phosphate (dihexadecyl hydrogen-phosphate) was spread as a monolayer at the…

Soft Condensed Matter · Physics 2007-05-23 Wei Bu , David Vaknin , Alex Travesset

Despite widespread interest, a detailed understanding of the dynamics of proton transfer at interfaces is lacking. Here we use ab initio molecular dynamics to unravel the connection between interfacial water structure and proton transfer…

Materials Science · Physics 2014-03-12 Gabriele Tocci , Angelos Michaelides

We model cyclic voltammetry experiments on supported lipid films where a non-trivial dependence of the capacitance on the applied voltage is observed. Previously, based on a mean-field treatment of the Flory-Huggins type, under the…

Soft Condensed Matter · Physics 2010-07-28 Andrey V. Brukhno , Anna Akinshina , Zachary Coldrick , Andrew Nelson , Stefan Auer

We present experiments, supported by mechanically detailed simulations, establishing bulk vapor-liquid condensation of a hard-bead fluid by a tiny population of orientable motile grains that self-assembles into a moving polarized monolayer.…

Soft Condensed Matter · Physics 2025-04-03 Raushan Kant , Rahul Kumar Gupta , Harsh Soni , A K Sood , Sriram Ramaswamy

Solid/liquid interfaces control various processes of technological relevance in the process industry and many fundamental physicochemical phenomena. This work examines the link between the atomistic description of mass transfer at…

Soft Condensed Matter · Physics 2021-09-07 Aaron R Finney , Matteo Salvalaglio

In this paper, we present a novel interface-driven adaptive variational procedure using a fully Eulerian description of fluid-structure interaction. The proposed fully-Eulerian procedure involves a fixed background unstructured mesh on…

Computational Physics · Physics 2022-02-08 Biswajeet Rath , Xiaoyu Mao , Rajeev K. Jaiman
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