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This paper presents the following results on sets that are complete for NP. 1. If there is a problem in NP that requires exponential time at almost all lengths, then every many-one NP-complete set is complete under length-increasing…

Computational Complexity · Computer Science 2010-02-03 Xiaoyang Gu , John M. Hitchcock , A. Pavan

The Shortest Common Superstring (SCS) problem is a fundamental task in sequence analysis. In genome assembly, however, the double-stranded nature of DNA implies that each fragment may occur either in its original orientation or as its…

Data Structures and Algorithms · Computer Science 2026-03-30 Ryosuke Yamano , Tetsuo Shibuya

Locally Decodable Codes (LDCs) are error-correcting codes $C\colon\Sigma^n\rightarrow \Sigma^m,$ encoding \emph{messages} in $\Sigma^n$ to \emph{codewords} in $\Sigma^m$, with super-fast decoding algorithms. They are important mathematical…

Information Theory · Computer Science 2026-03-03 Alexander R. Block , Jeremiah Blocki , Kuan Cheng , Elena Grigorescu , Xin Li , Yu Zheng , Minshen Zhu

A recent and active line of work achieves tight lower bounds for fundamental problems under the Strong Exponential Time Hypothesis (SETH). A celebrated result of Backurs and Indyk (STOC'15) proves that the Edit Distance of two sequences of…

Computational Complexity · Computer Science 2015-11-20 Amir Abboud , Thomas Dueholm Hansen , Virginia Vassilevska Williams , Ryan Williams

We introduce and study a discrete multi-period extension of the classical knapsack problem, dubbed generalized incremental knapsack. In this setting, we are given a set of $n$ items, each associated with a non-negative weight, and $T$ time…

Data Structures and Algorithms · Computer Science 2020-09-16 Yuri Faenza , Danny Segev , Lingyi Zhang

In this paper, we revisit the large-scale constrained linear regression problem and propose faster methods based on some recent developments in sketching and optimization. Our algorithms combine (accelerated) mini-batch SGD with a new…

Machine Learning · Computer Science 2018-02-12 Di Wang , Jinhui Xu

In this paper, we propose a data structure, a quadruple neighbor list (QN-list, for short), to support real time queries of all longest increasing subsequence (LIS) and LIS with constraints over sequential data streams. The QN-List built by…

Data Structures and Algorithms · Computer Science 2016-10-12 Youhuan Li , Lei Zou , Huaming Zhang , Dongyan Zhao

The field of exact exponential time algorithms for NP-hard problems has thrived over the last decade. While exhaustive search remains asymptotically the fastest known algorithm for some basic problems, difficult and non-trivial exponential…

Data Structures and Algorithms · Computer Science 2018-04-24 Marek Cygan , Holger Dell , Daniel Lokshtanov , Daniel Marx , Jesper Nederlof , Yoshio Okamoto , Ramamohan Paturi , Saket Saurabh , Magnus Wahlstrom

We show that there is no $2^{o(k^2)} n^{O(1)}$ time algorithm for Independent Set on $n$-vertex graphs with rank-width $k$, unless the Exponential Time Hypothesis (ETH) fails. Our lower bound matches the $2^{O(k^2)} n^{O(1)}$ time algorithm…

Data Structures and Algorithms · Computer Science 2022-12-09 Benjamin Bergougnoux , Tuukka Korhonen , Jesper Nederlof

Let $(X_n)_{n\ge 0}$ be an irreducible, aperiodic, and homogeneous binary Markov chain and let $LI_n$ be the length of the longest (weakly) increasing subsequence of $(X_k)_{1\le k \le n}$. Using combinatorial constructions and weak…

Probability · Mathematics 2012-08-27 Christian Houdré , Trevis J. Litherland

In this work we contribute to the study of the fine-grained complexity of problems parameterized by multi-clique-width, which was initiated by F\"urer [ITCS 2017] and pursued further by Chekan and Kratsch [MFCS 2023]. Multi-clique-width is…

Data Structures and Algorithms · Computer Science 2026-04-29 Benjamin Bergougnoux , Vera Chekan , Stefan Kratsch

Computation on compressed strings is one of the key approaches to processing massive data sets. We consider local subsequence recognition problems on strings compressed by straight-line programs (SLP), which is closely related to…

Data Structures and Algorithms · Computer Science 2011-11-10 Alexander Tiskin

In this paper we study lower bounds for the fundamental problem of text indexing with mismatches and differences. In this problem we are given a long string of length $n$, the "text", and the task is to preprocess it into a data structure…

Data Structures and Algorithms · Computer Science 2018-12-24 Vincent Cohen-Addad , Laurent Feuilloley , Tatiana Starikovskaya

In this work, we obtain the following new results. 1. Given a sequence $D=((h_1,s_1), (h_2,s_2) ..., (h_n,s_n))$ of number pairs, where $s_i>0$ for all $i$, and a number $L_h$, we propose an O(n)-time algorithm for finding an index interval…

Data Structures and Algorithms · Computer Science 2008-09-15 Hsiao-Fei Liu , Peng-An Chen , Kun-Mao Chao

In the Shortest Superstring problem we are given a set of strings $S=\{s_1, \ldots, s_n\}$ and integer $\ell$ and the question is to decide whether there is a superstring $s$ of length at most $\ell$ containing all strings of $S$ as…

Data Structures and Algorithms · Computer Science 2015-02-06 Ivan Bliznets , Fedor V. Fomin , Petr A. Golovach , Nikolay Karpov , Alexander S. Kulikov , Saket Saurabh

The length of the longest common subsequences (LCSs) is often used as a similarity measurement to compare two (or more) random words. Below we study its statistical behavior in mean and variance using a Monte-Carlo approach from which we…

Probability · Mathematics 2017-05-22 Qingqing Liu , Christian Houdré

We study the lengths of monotone subsequences for permutations drawn from the Mallows measure. The Mallows measure was introduced by Mallows in connection with ranking problems in statistics. Under this measure, the probability of a…

Probability · Mathematics 2016-06-29 Riddhipratim Basu , Nayantara Bhatnagar

The input to the NP-hard Point Line Cover problem (PLC) consists of a set $P$ of $n$ points on the plane and a positive integer $k$, and the question is whether there exists a set of at most $k$ lines which pass through all points in $P$. A…

Data Structures and Algorithms · Computer Science 2013-07-10 Stefan Kratsch , Geevarghese Philip , Saurabh Ray

Nonconvex optimization problems with an L1-constraint are ubiquitous, and are found in many application domains including: optimal control of hybrid systems, machine learning and statistics, and operations research. This paper shows that…

Optimization and Control · Mathematics 2017-09-27 Yonatan Mintz , Anil Aswani

In this paper we study the worst-case complexity of an inexact Augmented Lagrangian method for nonconvex constrained problems. Assuming that the penalty parameters are bounded, we prove a complexity bound of $\mathcal{O}(|\log(\epsilon)|)$…

Optimization and Control · Mathematics 2021-05-25 Geovani N. Grapiglia , Ya-xiang Yuan