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In this paper, we study the mixing time of Markov Chain Monte Carlo (MCMC) for integer least-square (LS) optimization problems. It is found that the mixing time of MCMC for integer LS problems depends on the structure of the underlying…

Information Theory · Computer Science 2012-03-13 Weiyu Xu , Alex Dimakis , Babak Hassibi

In this paper, we study edit distance (ED) and longest common subsequence (LCS) in the asymmetric streaming model, introduced by Saks and Seshadhri [SS13]. As an intermediate model between the random access model and the streaming model,…

Data Structures and Algorithms · Computer Science 2021-10-08 Xin Li , Yu Zheng

Given a string $T$ with length $n$ whose characters are drawn from an ordered alphabet of size $\sigma$, its longest Lyndon subsequence is a longest subsequence of $T$ that is a Lyndon word. We propose algorithms for finding such a…

Data Structures and Algorithms · Computer Science 2022-01-19 Hideo Bannai , Tomohiro I , Tomasz Kociumaka , Dominik Köppl , Simon J. Puglisi

We prove that the blocklength $n$ of a linear $3$-query locally correctable code (LCC) $\mathcal{L} \colon {\mathbb F}^k \to {\mathbb F}^n$ with distance $\delta$ must be at least $n \geq 2^{\Omega\left(\left(\frac{\delta^2 k}{(|{\mathbb…

Computational Complexity · Computer Science 2023-11-02 Pravesh K. Kothari , Peter Manohar

We consider the SUBSET SUM problem and its important variants in this paper. In the SUBSET SUM problem, a (multi-)set $X$ of $n$ positive numbers and a target number $t$ are given, and the task is to find a subset of $X$ with the maximal…

Data Structures and Algorithms · Computer Science 2022-12-07 Xiaoyu Wu , Lin Chen

Given several number sequences, determining the longest common subsequence is a classical problem in computer science. This problem has applications in bioinformatics, especially determining transposable genes. Nevertheless, related works…

Genomics · Quantitative Biology 2023-11-21 Yue Wang

The similarity between a pair of time series, i.e., sequences of indexed values in time order, is often estimated by the dynamic time warping (DTW) distance, instead of any in the well-studied family of measures including the longest common…

Data Structures and Algorithms · Computer Science 2022-04-19 Yoshifumi Sakai , Shunsuke Inenaga

Due to Savitch's theorem we know $NL\subseteq DSPACE(\log^2(n))$. To show this upper bound, Savitch constructed an algorithm with $O(\log^2(n))$ space on the working tape. We will show that Savitch's algorithm also described a lower bound…

Computational Complexity · Computer Science 2023-05-04 Reiner Czerwinski

We study local computation algorithms (LCA) for maximum matching. An LCA does not return its output entirely, but reveals parts of it upon query. For matchings, each query is a vertex $v$; the LCA should return whether $v$ is matched -- and…

Data Structures and Algorithms · Computer Science 2023-11-17 Soheil Behnezhad , Mohammad Roghani , Aviad Rubinstein

We study approximation algorithms for the following three string measures that are widely used in practice: edit distance (ED), longest common subsequence (LCS), and longest increasing sequence (LIS). All three problems can be solved…

Data Structures and Algorithms · Computer Science 2020-07-28 Kuan Cheng , Zhengzhong Jin , Xin Li , Yu Zheng

We present an algorithm computing the longest periodic subsequence of a string of length $n$ in $O(n^7)$ time with $O(n^4)$ words of space. We obtain improvements when restricting the exponents or extending the search allowing the reported…

Data Structures and Algorithms · Computer Science 2022-02-16 Hideo Bannai , Tomohiro I , Dominik Köppl

Maximal Common Subsequences (MCSs) between two strings X and Y are subsequences of both X and Y that are maximal under inclusion. MCSs relax and generalize the well known and widely used concept of Longest Common Subsequences (LCSs), which…

Data Structures and Algorithms · Computer Science 2023-07-26 Alessio Conte , Roberto Grossi , Giulia Punzi , Takeaki Uno

Locally Decodable Codes (LDCs) are error-correcting codes for which individual message symbols can be quickly recovered despite errors in the codeword. LDCs for Hamming errors have been studied extensively in the past few decades, where a…

Information Theory · Computer Science 2025-12-30 Jeremiah Blocki , Kuan Cheng , Elena Grigorescu , Xin Li , Yu Zheng , Minshen Zhu

Given a multiset $X=\{x_1,..., x_n\}$ of real numbers, the {\it floating-point set summation} problem asks for $S_n=x_1+...+x_n$. Let $E^*_n$ denote the minimum worst-case error over all possible orderings of evaluating $S_n$. We prove that…

Data Structures and Algorithms · Computer Science 2024-09-21 Ming-Yang Kao , Jie Wang

The sensitivity of long-time averages of a hyperbolic chaotic system to parameter perturbations can be determined using the shadowing direction, the uniformly-bounded-in-time solution of the sensitivity equations. Although its existence is…

Chaotic Dynamics · Physics 2019-05-22 Davide Lasagna , Ati Sharma , Johan Meyers

The Strong Exponential Time Hypothesis and the OV-conjecture are two popular hardness assumptions used to prove a plethora of lower bounds, especially in the realm of polynomial-time algorithms. The OV-conjecture in moderate dimension…

Computational Complexity · Computer Science 2018-05-23 Amir Abboud , Karl Bringmann , Holger Dell , Jesper Nederlof

Knapsack is one of the most fundamental problems in theoretical computer science. In the $(1 - \epsilon)$-approximation setting, although there is a fine-grained lower bound of $(n + 1 / \epsilon) ^ {2 - o(1)}$ based on the $(\min,…

Data Structures and Algorithms · Computer Science 2025-08-12 Xiao Mao

We show polynomial-time quantum algorithms for the following problems: (*) Short integer solution (SIS) problem under the infinity norm, where the public matrix is very wide, the modulus is a polynomially large prime, and the bound of…

Quantum Physics · Physics 2021-10-07 Yilei Chen , Qipeng Liu , Mark Zhandry

Let $s$ be a finite sequence over a field of length $n$. It is well-known that if $s$ satisfies a linear recurrence of order $d$ with non-zero constant term, then the reverse of $s$ also satisfies a recurrence of order $d$ (with…

Information Theory · Computer Science 2010-07-26 Graham H. Norton

It is well-known that for a quickly increasing sequence $(n_k)_{k \geq 1}$ the functions $(\cos 2 \pi n_k x)_{k \geq 1}$ show a behavior which is typical for sequences of independent random variables. If the growth condition on $(n_k)_{k…

Number Theory · Mathematics 2014-03-10 Christoph Aistleitner , Katusi Fukuyama
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