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HDBSCAN is a density-based clustering algorithm that constructs a cluster hierarchy tree and then uses a specific stability measure to extract flat clusters from the tree. We show how the application of an additional threshold value can…

Databases · Computer Science 2021-01-22 Claudia Malzer , Marcus Baum

We present an accelerated algorithm for hierarchical density based clustering. Our new algorithm improves upon HDBSCAN*, which itself provided a significant qualitative improvement over the popular DBSCAN algorithm. The accelerated HDBSCAN*…

Machine Learning · Statistics 2018-12-20 Leland McInnes , John Healy

This paper focuses on density-based clustering, particularly the Density Peak (DP) algorithm and the one based on density-connectivity DBSCAN; and proposes a new method which takes advantage of the individual strengths of these two methods…

Machine Learning · Computer Science 2024-01-30 Ye Zhu , Kai Ming Ting , Yuan Jin , Maia Angelova

We present a new algorithm for the widely used density-based clustering method DBscan. Our algorithm computes the DBscan-clustering in $O(n\log n)$ time in $\mathbb{R}^2$, irrespective of the scale parameter $\varepsilon$ (and assuming the…

Computational Geometry · Computer Science 2017-03-01 Mark de Berg , Ade Gunawan , Marcel Roeloffzen

This paper presents new parallel algorithms for generating Euclidean minimum spanning trees and spatial clustering hierarchies (known as HDBSCAN$^*$). Our approach is based on generating a well-separated pair decomposition followed by using…

Data Structures and Algorithms · Computer Science 2021-04-05 Yiqiu Wang , Shangdi Yu , Yan Gu , Julian Shun

DBSCAN is a classical density-based clustering procedure with tremendous practical relevance. However, DBSCAN implicitly needs to compute the empirical density for each sample point, leading to a quadratic worst-case time complexity, which…

Machine Learning · Computer Science 2019-05-21 Jennifer Jang , Heinrich Jiang

Clustering is a fundamental task in machine learning. One of the most successful and broadly used algorithms is DBSCAN, a density-based clustering algorithm. DBSCAN requires $\epsilon$-nearest neighbor graphs of the input dataset, which are…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-12 Youguang Chen , William Ruys , George Biros

Clustering is a cornerstone of modern data analysis. Detecting clusters in exploratory data analyses (EDA) requires algorithms that make few assumptions about the data. Density-based clustering algorithms are particularly well-suited for…

Machine Learning · Computer Science 2026-02-03 Daniël Bot , Leland McInnes , Jan Aerts

Hierarchical Density-Based Spatial Clustering of Applications with Noise (HDBSCAN) finds meaningful patterns in spatial data by considering density and spatial proximity. As the clustering algorithm is inherently designed for static…

Databases · Computer Science 2024-12-12 Kayumov Abduaziz , Min Sik Kim , Ji Sun Shin

DBSCAN is a typically used clustering algorithm due to its clustering ability for arbitrarily-shaped clusters and its robustness to outliers. Generally, the complexity of DBSCAN is O(n^2) in the worst case, and it practically becomes more…

Databases · Computer Science 2018-01-23 Thapana Boonchoo , Xiang Ao , Qing He

We study the problem of optimal estimation of the density cluster tree under various assumptions on the underlying density. Building up from the seminal work of Chaudhuri et al. [2014], we formulate a new notion of clustering consistency…

Statistics Theory · Mathematics 2019-12-05 Daren Wang , Xinyang Lu , Alessandro Rinaldo

Most community detection approaches make very strong assumptions about communities in the data, such as every vertex must belong to exactly one community (the communities form a partition). For vector data, Hierarchical Density Based…

Social and Information Networks · Computer Science 2025-09-03 Ryan DeWolfe

Density-based clustering has found numerous applications across various domains. The Density-Based Spatial Clustering of Applications with Noise (DBSCAN) algorithm is capable of finding clusters of varied shapes that are not linearly…

Databases · Computer Science 2019-12-03 Vinayak Mathur , Jinesh Mehta , Sanjay Singh

Density-based clustering techniques are used in a wide range of data mining applications. One of their most attractive features con- sists in not making use of prior knowledge of the number of clusters that a dataset contains along with…

Machine Learning · Computer Science 2018-07-24 Roberto Pirrone , Vincenzo Cannella , Sergio Monteleone , Gabriella Giordano

DBSCAN* and HDBSCAN* are well established density based clustering algorithms. However, obtaining the clusters of very large datasets is infeasible, limiting their use in real world applications. By exploiting the geometry of Euclidean…

Machine Learning · Computer Science 2022-03-16 A. L. Garcia-Pulido , K. P. Samardzhiev

Clustering procedures suitable for the analysis of very high-dimensional data are needed for many modern data sets. In model-based clustering, a method called high-dimensional data clustering (HDDC) uses a family of Gaussian mixture models…

Methodology · Statistics 2017-06-28 Angelina Pesevski , Brian C. Franczak , Paul D. McNicholas

DBSCAN has been widely used in density-based clustering algorithms. However, with the increasing demand for Multi-density clustering, previous traditional DSBCAN can not have good clustering results on Multi-density datasets. In order to…

Databases · Computer Science 2023-10-10 Ziqing Wang , Zhirong Ye , Yuyang Du , Yi Mao , Yanying Liu , Ziling Wu , Jun Wang

This paper introduces a novel formulation of the clustering problem, namely the Minimum Sum-of-Squares Clustering of Infinitely Tall Data (MSSC-ITD), and presents HPClust, an innovative set of hybrid parallel approaches for its effective…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-26 Ravil Mussabayev , Rustam Mussabayev

Cluster separation is a task typically tackled by widely used clustering techniques, such as k-means or DBSCAN. However, these algorithms are based on non-perceptual metrics, and our experiments demonstrate that their output does not…

Machine Learning · Computer Science 2025-01-31 Sebastian Hartwig , Christian van Onzenoodt , Dominik Engel , Pedro Hermosilla , Timo Ropinski

We propose a novel approach to the problem of clustering hierarchically aggregated time-series data, which has remained an understudied problem though it has several commercial applications. We first group time series at each aggregated…

Machine Learning · Computer Science 2022-05-30 Xing Han , Tongzheng Ren , Jing Hu , Joydeep Ghosh , Nhat Ho
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