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An abundance of information about cancer exists online, but categorizing and extracting useful information from it is difficult. Almost all research within healthcare data processing is concerned with formal clinical data, but there is…

Information Retrieval · Computer Science 2023-03-30 Jimmi Agerskov , Kristian Nielsen , Christian Marius Lillelund , Christian Fischer Pedersen

Automated narrative intelligence systems for social media monitoring face significant scalability challenges when relying on batch clustering methods to process continuous data streams. We investigate replacing offline HDBSCAN with online…

Computation and Language · Computer Science 2026-02-11 Ostap Vykhopen , Viktoria Skorik , Maksym Tereshchenko , Veronika Solopova

FISHDBC is a flexible, incremental, scalable, and hierarchical density-based clustering algorithm. It is flexible because it empowers users to work on arbitrary data, skipping the feature extraction step that usually transforms raw data in…

Machine Learning · Computer Science 2019-10-17 Matteo Dell'Amico

We present an unsupervised data processing workflow that is specifically designed to obtain a fast conformational clustering of long molecular dynamics simulation trajectories. In this approach we combine two dimensionality reduction…

Chemical Physics · Physics 2023-08-09 Simon Hunkler , Kay Diederichs , Oleksandra Kukharenko , Christine Peter

Data stream clustering reveals patterns within continuously arriving, potentially unbounded data sequences. Numerous data stream algorithms have been proposed to cluster data streams. The existing data stream clustering algorithms still…

Machine Learning · Computer Science 2025-07-02 Jie Chen , Hua Mao , Yuanbiao Gou , Xi Peng

Standard Gaussian Process (GP) regression, a powerful machine learning tool, is computationally expensive when it is applied to large datasets, and potentially inaccurate when data points are sparsely distributed in a high-dimensional…

Machine Learning · Computer Science 2016-03-08 Z. Zhang , K. Duraisamy , N. A. Gumerov

Clustering techniques are very attractive for extracting and identifying patterns in datasets. However, their application to very large spatial datasets presents numerous challenges such as high-dimensionality data, heterogeneity, and high…

Databases · Computer Science 2018-02-27 Malika Bendechache , Nhien-An Le-Khac , M-Tahar Kechadi

Hierarchical clustering is a critical task in numerous domains. Many approaches are based on heuristics and the properties of the resulting clusterings are studied post hoc. However, in several applications, there is a natural cost function…

Structural clustering is one of the most popular graph clustering methods, which has achieved great performance improvement by utilizing GPUs. Even though, the state-of-the-art GPU-based structural clustering algorithm, GPUSCAN, still…

Databases · Computer Science 2023-12-01 Long Yuan , Zeyu Zhou , Xuemin Lin , Zi Chen , Xiang Zhao , Fan Zhang

We propose the DPSM method, a density-based node clustering approach that automatically determines the number of clusters and can be applied in both data space and graph space. Unlike traditional density-based clustering methods, which…

Machine Learning · Computer Science 2024-11-05 Feiping Nie , Yitao Song , Jingjing Xue , Rong Wang , Xuelong Li

Hierarchical clustering is a powerful tool for exploratory data analysis, organizing data into a tree of clusterings from which a partition can be chosen. This paper generalizes these ideas by proving that, for any reasonable hierarchy, one…

Machine Learning · Computer Science 2025-11-13 Andrew Draganov , Pascal Weber , Rasmus Skibdahl Melanchton Jørgensen , Anna Beer , Claudia Plant , Ira Assent

Bagging and boosting are proved to be the best methods of building multiple classifiers in classification combination problems. In the area of "flat clustering" problems, it is also recognized that multi-clustering methods based on boosting…

Machine Learning · Computer Science 2018-05-31 Elaheh Rashedi , Abdolreza Mirzaei

Clustering real world data often faced with curse of dimensionality, where real world data often consist of many dimensions. Multidimensional data clustering evaluation can be done through a density-based approach. Density approaches based…

Databases · Computer Science 2010-12-30 Rahmat Widia Sembiring , Jasni Mohamad Zain

DBSCAN is one of the most important non-parametric unsupervised data analysis tools. By applying DBSCAN to a dataset, two key analytical results can be obtained: (1) clustering data points based on density distribution and (2) identifying…

Computer Vision and Pattern Recognition · Computer Science 2024-12-04 Yongyu Wang

The widely applied density peak clustering (DPC) algorithm makes an intuitive cluster formation assumption that cluster centers are often surrounded by data points with lower local density and far away from other data points with higher…

Machine Learning · Computer Science 2022-01-04 Yizhang Wang , Di Wang , You Zhou , Xiaofeng Zhang , Chai Quek

Carlsson, Singh and Memoli's TDA mapper takes a point cloud dataset and outputs a graph that depends on several parameter choices. Dey, Memoli, and Wang developed Multiscale Mapper for abstract topological spaces so that parameter choices…

Algebraic Topology · Mathematics 2024-09-27 Wako Bungula , Isabel Darcy

High-Performance Computing (HPC) systems need to be constantly monitored to ensure their stability. The monitoring systems collect a tremendous amount of data about different parameters or Key Performance Indicators (KPIs), such as resource…

Artificial Intelligence · Computer Science 2023-12-12 Mohamed Soliman Halawa , Rebeca P. Díaz-Redondo , Ana Fernández-Vilas

DBSCAN is a popular density-based clustering algorithm that has many different applications in practice. However, the running time of DBSCAN in high-dimensional space or general metric space ({\em e.g.,} clustering a set of texts by using…

Data Structures and Algorithms · Computer Science 2025-01-07 Guanlin Mo , Shihong Song , Hu Ding

Density-based clustering algorithms are widely used for discovering clusters in pattern recognition and machine learning since they can deal with non-hyperspherical clusters and are robustness to handle outliers. However, the runtime of…

Machine Learning · Computer Science 2022-07-07 Difei Cheng , Ruihang Xu , Bo Zhang , Ruinan Jin

High-throughput spectrometers are capable of producing data sets containing thousands of spectra for a single biological sample. These data sets contain a substantial amount of redundancy from peptides that may get selected multiple times…

Data Structures and Algorithms · Computer Science 2013-01-08 Fahad Saeed , Trairak Pisitkun , Mark A. Knepper , Jason D. Hoffert