Related papers: S-trees
The junction-tree representation provides an attractive structural property for organizing a decomposable graph. In this study, we present two novel stochastic algorithms, which we call the junction-tree expander and junction-tree collapser…
Graph decompositions are the natural generalisation of tree decompositions where the decomposition tree is replaced by a genuine graph. Recently they found theoretical applications in the theory of sparsity, topological graph theory,…
This paper proposes an algebraic view of trees which opens the doors to an alternative computational scheme with respect to classic algorithms. In particular, it is shown that this view is very well-suited for machine learning and…
We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…
We propose a new arithmetic for non-empty rooted unordered trees simply called trees. After discussing tree representation and enumeration, we define the operations of tree addition, multiplication and stretch, prove their properties, and…
We address the problem of representing dynamic graphs using $k^2$-trees. The $k^2$-tree data structure is one of the succinct data structures proposed for representing static graphs, and binary relations in general. It relies on compact…
Leaf powers and pairwise compatibility graphs were introduced over twenty years ago as simplified graph models for phylogenetic trees. Despite significant research, several properties of these graph classes remain poorly understood. In this…
A connected graph has tree-depth at most $k$ if it is a subgraph of the closure of a rooted tree whose height is at most $k$. We give an algorithm which for a given $n$-vertex graph $G$, in time $\mathcal{O}(1.9602^n)$ computes the…
We propose BS-tree, an in-memory implementation of the B+-tree that adopts the structure of the disk-based index (i.e., a balanced, multiway tree), setting the node size to a memory block that can be processed fast and in parallel using…
This paper introduces a data structure, called simplex tree, to represent abstract simplicial complexes of any dimension. All faces of the simplicial complex are explicitly stored in a trie whose nodes are in bijection with the faces of the…
A tree with at most k leaves is called k-ended tree, and a tree with exactly k leaves is called k-end tree, where a leaf is a vertex of degree one. Contraction of a graph G along the edge e means deleting the edge e and identifying its end…
We study the crossing-minimization problem in a layered graph drawing of planar-embedded rooted trees whose leaves have a given total order on the first layer, which adheres to the embedding of each individual tree. The task is then to…
Taking a Feynman categorical perspective, several key aspects of the geometry of surfaces are deduced from combinatorial constructions with graphs. This provides a direct route from combinatorics of graphs to string topology operations via…
A new 2-parameter family of central structures in trees, called central forests, is introduced. Minieka's $m$-center problem and McMorris's and Reid's central-$k$-tree can be seen as special cases of central forests in trees. A central…
We generalise various theorems for finding indiscernible trees and arrays to positive logic: based on an existing modelling theorem for s-trees, we prove modelling theorems for str-trees, str$_0$-trees (the reduct of str-trees that forgets…
Robertson and Seymour proved two fundamental theorems about tangles in graphs: the tree-of-tangles theorem, which says that every graph has a tree-decomposition such that distinguishable tangles live in different nodes of the tree, and the…
The tree of decomposition of a $k$-connected graph by a set $\mathfrak S$ of pairwise independent $k$-vertex cutsets is defined as follows. The vertices of this tree are cutsets of $\mathfrak S$ and parts of decomposition of the graph by…
We consider questions related to the existence of spanning trees in graphs with the property that after the removal of any path in the tree the graph remains connected. We show that, for planar graphs, the existence of trees with this…
Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…
For a simple drawing $D$ of the complete graph $K_n$, two (plane) subdrawings are compatible if their union is plane. Let $\mathcal{T}_D$ be the set of all plane spanning trees on $D$ and $\mathcal{F}(\mathcal{T}_D)$ be the compatibility…