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The dynamics of living systems often serves the purpose of reaching functionally important target states. We previously proposed a theory to analyze stochastic biological dynamics evolving towards target states in reverse time. However, a…

Biological Physics · Physics 2023-04-11 Nicolas Lenner , Matthias Häring , Stephan Eule , Jörg Großhans , Fred Wolf

We study the synchronization behavior of a noisy network in which each system is driven by two sources of state-dependent noise: (1) an intrinsic noise which is common among all systems and can be generated by the environment or any…

Dynamical Systems · Mathematics 2021-03-09 Zahra Aminzare , Vaibhav Srivastava

Measured responses from visual cortical neurons show that spike times tend to be correlated rather than exactly Poisson distributed. Fano factors vary and are usually greater than 1 due to the tendency of spikes being clustered into bursts.…

Neurons and Cognition · Quantitative Biology 2007-05-23 Alexander Lerchner , Mandana Ahmadi , John Hertz

The collective behavior of cortical neurons is strongly affected by the presence of noise at the level of individual cells. In order to study these phenomena in large-scale assemblies of neurons, we consider networks of firing-rate neurons…

Dynamical Systems · Mathematics 2015-03-27 Jonathan Touboul , Geoffroy Hermann , Olivier Faugeras

A plethora of computational models have been developed in recent decades to account for the morphogenesis of complex biological fluid networks, such as capillary beds. Contemporary adaptation models are based on optimization schemes where…

Tissues and Organs · Quantitative Biology 2021-11-16 Felix Kramer , Carl D. Modes

We derive an exact representation of the topological effect on the dynamics of sequence processing neural networks within signal-to-noise analysis. A new network structure parameter, loopiness coefficient, is introduced to quantitatively…

Disordered Systems and Neural Networks · Physics 2008-05-11 Pan Zhang , Yong Chen

We investigate the emergence of a collective periodic behavior in a frustrated network of interacting diffusions. Particles are divided into two communities depending on their mutual couplings. On the one hand, both intra-population…

Probability · Mathematics 2023-02-27 Elisa Marini , Luisa Andreis , Francesca Collet , Marco Formentin

The famous Johnson-Nyquist formula relating noise current to conductance has a microscopic generalization relating noise current density to microscopic conductivity, with corollary relations governing noise in the components of the…

Computational Physics · Physics 2013-08-27 M. T. Homer Reid , Alejandro W. Rodriguez , Steven G. Johnson

An important challenge in quantum science is to fully understand the efficiency of energy flow in networks. Here we present a simple and intuitive explanation for the intriguing observation that optimally efficient networks are not purely…

Quantum Physics · Physics 2015-03-24 Ying Li , Filippo Caruso , Erik Gauger , Simon C. Benjamin

We study the synchronization of chaotic units connected through time-delayed fluctuating interactions. We focus on small-world networks of Bernoulli and Logistic units with a fixed chiral backbone. Comparing the synchronization properties…

Biological systems often consist of a small number of constituents and are therefore inherently noisy. To function effectively, these systems must employ mechanisms to constrain the accumulation of noise. Such mechanisms have been…

Statistical Mechanics · Physics 2024-09-04 Felix J. Meigel , Steffen Rulands

We discuss and briefly overview recent progress with studying fluctuations in scattering on a resonance state coupled to the background of many chaotic states. Such a problem arises naturally, e.g., when dealing with wave propagation in the…

Quantum Physics · Physics 2017-12-21 D. V. Savin

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

Populations and Evolution · Quantitative Biology 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri

Noise threads every scale of the natural world. Once dismissed as mere background hiss, it is now recognized as both a currency of information and a source of order in systems driven far from equilibrium. From nanometer-scale motor proteins…

Soft Condensed Matter · Physics 2025-08-25 Atanu Chatterjee , Tuhin Chakrabortty , Saad Bhamla

Fluctuating environments are situations where the spatio-temporal stochasticity plays a significant role in the evolutionary dynamics. The study of the evolution of cooperation in these environments typically assumes a homogeneous, well…

Populations and Evolution · Quantitative Biology 2024-11-01 Viktor Stojkoski , Marko Karbevski , Zoran Utkovski , Lasko Basnarkov , Ljupco Kocarev

Power system coherency refers to the phenomenon that machines in a power network exhibit similar frequency responses after disturbances, and is foundational for model reduction and control design. Despite abundant empirical observations,…

Systems and Control · Electrical Eng. & Systems 2025-11-11 Yixuan Liu , Yingzhu Liu , Pengcheng You

In most natural sciences there is currently the insight that it is necessary to bridge gaps between different processes which can be observed on different scales. This is especially true in the field of chemical reactions where the…

Molecular Networks · Quantitative Biology 2008-03-03 L. Sbano , M. Kirkilionis

The fluctuating dynamics of a network about its stable, noise-free steady state are theoretically investigated. Various causes of non-equilibrium dynamics are identified in terms of the properties and symmetry of the network connections and…

Statistical Mechanics · Physics 2026-04-15 Pik-Yin Lai

The activated rate process for non-equilibrium open systems is studied taking into account both internal and external noise fluctuations in a unified way. The probability of a particle diffusing passing over the saddle point and the rate…

Chemical Physics · Physics 2015-06-11 Chun-Yang Wang

Many natural, complex systems are remarkably stable thanks to an absence of feedback acting on their elements. When described as networks, these exhibit few or no cycles, and associated matrices have small leading eigenvalues. It has been…

Physics and Society · Physics 2017-06-12 Samuel Johnson , Nick S. Jones
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