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Encoding data structures store enough information to answer the queries they are meant to support but not enough to recover their underlying datasets. In this paper we give the first encoding data structure for the challenging problem of…

Data Structures and Algorithms · Computer Science 2017-02-21 Travis Gagie , Giovanni Manzini , Rossano Venturini

Byte-Pair Encoding (BPE) is a popular algorithm used for tokenizing data in NLP, despite being devised initially as a compression method. BPE appears to be a greedy algorithm at face value, but the underlying optimization problem that BPE…

Computation and Language · Computer Science 2024-09-04 Vilém Zouhar , Clara Meister , Juan Luis Gastaldi , Li Du , Tim Vieira , Mrinmaya Sachan , Ryan Cotterell

The mapping of lexical meanings to wordforms is a major feature of natural languages. While usage pressures might assign short words to frequent meanings (Zipf's law of abbreviation), the need for a productive and open-ended vocabulary,…

Computation and Language · Computer Science 2021-05-04 Tiago Pimentel , Irene Nikkarinen , Kyle Mahowald , Ryan Cotterell , Damián Blasi

We consider the communication complexity of the Hamming distance of two strings. Bille et al. [SPIRE 2018] considered the communication complexity of the longest common prefix (LCP) problem in the setting where the two parties have their…

Data Structures and Algorithms · Computer Science 2021-04-02 Shiori Mitsuya , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

It is shown that for a given ordered node-labelled tree of size $n$ and with $s$ many different node labels, one can construct in linear time a top dag of height $O(\log n)$ and size $O(n / \log_\sigma n) \cap O(d \cdot \log n)$, where…

Data Structures and Algorithms · Computer Science 2017-12-19 Markus Lohrey , Carl Philipp Reh , Kurt Sieber

Consider the case where consecutive blocks of N letters of a semi-infinite individual sequence X over a finite-alphabet are being compressed into binary sequences by some one-to-one mapping. No a-priori information about X is available at…

Information Theory · Computer Science 2013-01-25 Jacob Ziv

The greedy algorithm adapted from Kruskal's algorithm is an efficient and folklore way to produce a $k$-spanner with girth at least $k+2$. The greedy algorithm has shown to be `existentially optimal', while it's not `universally optimal'…

Data Structures and Algorithms · Computer Science 2024-11-05 Yeyuan Chen

Much research has been devoted to optimizing algorithms of the Lempel-Ziv (LZ) 77 family, both in terms of speed and memory requirements. Binary search trees and suffix trees (ST) are data structures that have been often used for this…

Data Structures and Algorithms · Computer Science 2016-11-17 Artur Ferreira , Arlindo Oliveira , Mario Figueiredo

The compact directed acyclic word graph (CDAWG) of a string $T$ is an index occupying $O(\mathsf{e})$ space, where $\mathsf{e}$ is the number of right extensions of maximal repeats in $T$. For highly repetitive datasets, the measure…

Data Structures and Algorithms · Computer Science 2024-10-22 Shunsuke Inenaga , Dmitry Kosolobov

Converting a compressed format of a string into another compressed format without an explicit decompression is one of the central research topics in string processing. We discuss the problem of converting the run-length Burrows-Wheeler…

Data Structures and Algorithms · Computer Science 2019-02-15 Takaaki Nishimoto , Yasuo Tabei

It is well-known that, given a probability distribution over $n$ characters, in the worst case it takes (\Theta (n \log n)) bits to store a prefix code with minimum expected codeword length. However, in this paper we first show that, for…

Data Structures and Algorithms · Computer Science 2009-05-20 Travis Gagie , Gonzalo Navarro , Yakov Nekrich

Following (Kolpakov et al., 2013; Gawrychowski and Manea, 2015), we continue the study of {\em $\alpha$-gapped repeats} in strings, defined as factors $uvu$ with $|uv|\leq \alpha |u|$. Our main result is the $O(\alpha n)$ bound on the…

Formal Languages and Automata Theory · Computer Science 2015-10-05 Maxime Crochemore , Roman Kolpakov , Gregory Kucherov

We prove new upper bounds on the size of families of vectors in $\Z_m^n$ with restricted modular inner products, when $m$ is a large integer. More formally, if $\vec{u}_1,\ldots,\vec{u}_t \in \Z_m^n$ and $\vec{v}_1,\ldots,\vec{v}_t \in…

Combinatorics · Mathematics 2013-04-19 Zeev Dvir , Guangda Hu

A well-known fact in the field of lossless text compression is that high-order entropy is a weak model when the input contains long repetitions. Motivated by this, decades of research have generated myriads of so-called dictionary…

Data Structures and Algorithms · Computer Science 2020-12-17 Dominik Kempa , Nicola Prezza

We consider the lossless compression bound of any individual data sequence. If we fit the data by a parametric model, the entropy quantity $nH({\hat \theta}_n)$ obtained by plugging in the maximum likelihood estimate is an underestimate of…

Information Theory · Computer Science 2024-01-23 Lei M Li

The Sliding Window Lempel-Ziv (SWLZ) algorithm that makes use of recurrence times and match lengths has been studied from various perspectives in information theory literature. In this paper, we undertake a finer study of these quantities…

Information Theory · Computer Science 2016-11-17 Siddharth Jain , R. K. Bansal

Efficient optimal prefix coding has long been accomplished via the Huffman algorithm. However, there is still room for improvement and exploration regarding variants of the Huffman problem. Length-limited Huffman coding, useful for many…

Information Theory · Computer Science 2007-07-13 Michael B. Baer

Some new results are derived concerning random coding error exponents and expurgated exponents for list decoding with a deterministic list size $L$. Two asymptotic regimes are considered, the fixed list-size regime, where $L$ is fixed…

Information Theory · Computer Science 2016-11-17 Neri Merhav

We examine the minimum entropy coupling problem, where one must find the minimum entropy variable that has a given set of distributions $S = \{p_1, \dots, p_m \}$ as its marginals. Although this problem is NP-Hard, previous works have…

Information Theory · Computer Science 2022-03-11 Spencer Compton

Maximally recoverable codes are codes designed for distributed storage which combine quick recovery from single node failure and optimal recovery from catastrophic failure. Gopalan et al [SODA 2017] studied the alphabet size needed for such…

Combinatorics · Mathematics 2017-04-04 Daniel Kane , Shachar Lovett , Sankeerth Rao