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Grammar compression is, next to Lempel-Ziv (LZ77) and run-length Burrows-Wheeler transform (RLBWT), one of the most flexible approaches to representing and processing highly compressible strings. The main idea is to represent a text as a…

Data Structures and Algorithms · Computer Science 2022-01-06 Dominik Kempa , Ben Langmead

We study the complexity of constructing an optimal parsing $\varphi$ of a string ${\bf s} = s_1 \dots s_n$ under the constraint that given a position $p$ in the original text, and the LZ76-like (Lempel Ziv 76) encoding of $T$ based on…

Data Structures and Algorithms · Computer Science 2024-03-26 Ferdinando Cicalese , Francesca Ugazio

We give algorithms that, given a straight-line program (SLP) with $g$ rules that generates (only) a text $T [1..n]$, builds within $O(g)$ space the Lempel-Ziv (LZ) parse of $T$ (of $z$ phrases) in time $O(n\log^2 n)$ or in time…

Data Structures and Algorithms · Computer Science 2023-10-11 Travis Gagie , Adrián Goga , Artur Jeż , Gonzalo Navarro

We show that the compressed suffix array and the compressed suffix tree of a string $T$ can be built in $O(n)$ deterministic time using $O(n\log\sigma)$ bits of space, where $n$ is the string length and $\sigma$ is the alphabet size.…

Data Structures and Algorithms · Computer Science 2016-11-15 J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

Classically, the edit distance of two length-$n$ strings can be computed in $O(n^2)$ time, whereas an $O(n^{2-\epsilon})$-time procedure would falsify the Orthogonal Vectors Hypothesis. If the edit distance does not exceed $k$, the running…

Data Structures and Algorithms · Computer Science 2023-11-06 Daniel Gibney , Ce Jin , Tomasz Kociumaka , Sharma V. Thankachan

We present an algorithm which computes the Lempel-Ziv factorization of a word $W$ of length $n$ on an alphabet $\Sigma$ of size $\sigma$ online in the following sense: it reads $W$ starting from the left, and, after reading each $r =…

Data Structures and Algorithms · Computer Science 2012-12-03 Tatiana Starikovskaya

Today there are many universal compression algorithms, but in most cases is for specific data better using specific algorithm - JPEG for images, MPEG for movies, etc. For textual documents there are special methods based on PPM algorithm or…

Information Theory · Computer Science 2008-12-18 Jan Platos , Jiri Dvorsky

In a seminal paper of Charikar et al. on the smallest grammar problem, the authors derive upper and lower bounds on the approximation ratios for several grammar-based compressors, but in all cases there is a gap between the lower and upper…

Data Structures and Algorithms · Computer Science 2019-08-20 Hideo Bannai , Momoko Hirayama , Danny Hucke , Shunsuke Inenaga , Artur Jez , Markus Lohrey , Carl Philipp Reh

The problem of determining the best achievable performance of arbitrary lossless compression algorithms is examined, when correlated side information is available at both the encoder and decoder. For arbitrary source-side information pairs,…

Information Theory · Computer Science 2020-07-15 Lampros Gavalakis , Ioannis Kontoyiannis

A common complaint about adaptive prefix coding is that it is much slower than static prefix coding. Karpinski and Nekrich recently took an important step towards resolving this: they gave an adaptive Shannon coding algorithm that encodes…

Information Theory · Computer Science 2008-12-18 Travis Gagie , Yakov Nekrich

Greedy algorithms have been successfully analyzed and applied in training neural networks for solving variational problems, ensuring guaranteed convergence orders. In this paper, we extend the analysis of the orthogonal greedy algorithm…

Numerical Analysis · Mathematics 2025-04-21 Jinchao Xu , Xiaofeng Xu

In this paper, we present the following results: (1) We propose a new \emph{dynamic compressed index} of $O(w)$ space, that supports searching for a pattern $P$ in the current text in $O(|P| f(M,w) + \log w \log |P| \log^* M (\log N + \log…

Data Structures and Algorithms · Computer Science 2016-04-07 Takaaki Nishimoto , I Tomohiro , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Lempel-Ziv-Double (LZD) is a variation of the LZ78 compression scheme that achieves better compression on repetitive datasets. Nevertheless, prior research has identified computational inefficiencies and a weakness in its compressibility…

Data Structures and Algorithms · Computer Science 2025-05-05 Linus Götz , Dominik Köppl

Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…

Data Structures and Algorithms · Computer Science 2016-09-01 Shouhei Fukunaga , Yoshimasa Takabatake , I Tomohiro , Hiroshi Sakamoto

Efficient optimal prefix coding has long been accomplished via the Huffman algorithm. However, there is still room for improvement and exploration regarding variants of the Huffman problem. Length-limited Huffman coding, useful for many…

Information Theory · Computer Science 2007-07-13 Michael B. Baer

Given a set of strings, the shortest common superstring problem is to find the shortest possible string that contains all the input strings. The problem is NP-hard, but a lot of work has gone into designing approximation algorithms for…

Data Structures and Algorithms · Computer Science 2019-12-04 Jarno Alanko , Tuukka Norri

In this paper we present a simple linear-time algorithm constructing a context-free grammar of size O(g log(N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this string.…

Data Structures and Algorithms · Computer Science 2013-11-08 Artur Jeż

We describe the first self-indexes able to count and locate pattern occurrences in optimal time within a space bounded by the size of the most popular dictionary compressors. To achieve this result we combine several recent findings,…

Data Structures and Algorithms · Computer Science 2019-09-06 Anders Roy Christiansen , Mikko Berggren Ettienne , Tomasz Kociumaka , Gonzalo Navarro , Nicola Prezza

In this paper, we propose a novel approach to combine \emph{compact directed acyclic word graphs} (CDAWGs) and grammar-based compression. This leads us to an efficient self-index, called Linear-size CDAWGs (L-CDAWGs), which can be…

Data Structures and Algorithms · Computer Science 2017-07-28 Takuya Takagi , Keisuke Goto , Yuta Fujishige , Shunsuke Inenaga , Hiroki Arimura

The compressed indexing problem is to preprocess a string $S$ of length $n$ into a compressed representation that supports pattern matching queries. That is, given a string $P$ of length $m$ report all occurrences of $P$ in $S$. We present…

Data Structures and Algorithms · Computer Science 2018-04-12 Anders Roy Christiansen , Mikko Berggren Ettienne
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