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Atherosclerosis is one of the principle pathologies of cardiovascular disease with blood cholesterol a significant risk factor. The World Health Organisation estimates that approximately 2.5 million deaths occur annually due to the risk…

Tissues and Organs · Quantitative Biology 2015-10-08 Andrew Parton , Victoria McGilligan , Maurice OKane , Francina R Baldrick , Steven Watterson

In this article, we review the mathematical modeling for the vascular system.

Tissues and Organs · Quantitative Biology 2021-04-23 Ju Liu , Ingrid S. Lan , Alison L. Marsden

Some existing models of the atherosclerosis development are discussed and a new improved mathematical model, which takes into account new experimental results about diverse roles of macrophages in atherosclerosis, is proposed. Using technic…

Analysis of PDEs · Mathematics 2022-01-03 Taras A. Mel'nyk

We present and critically discuss five commonly used mathematical models of the meal glucose rate of appearance in humans. Such models are key to simulation of the metabolism in healthy people, people with diabetes, and obese people, and…

Systems and Control · Electrical Eng. & Systems 2023-08-01 Tobias K. S. Ritschel , Asbjørn Thode Reenberg , Peter Emil Carstensen , Jacob Bendsen , John Bagterp Jørgensen

This paper presents a comprehensive survey of various established mathematical models pertaining to Somitogenesis, a biological process. The study begins by revisiting and replicating the findings from prominent research papers in this…

Dynamical Systems · Mathematics 2023-10-09 Hanyu Song

We propose a whole-body model of the metabolism in man as well as a generalized approach for modeling metabolic networks. Using this approach, we are able to write a large metabolic network in a systematic and compact way. We demonstrate…

Quantitative Methods · Quantitative Biology 2022-05-04 Peter Emil Carstensen , Jacob Bendsen , Asbjørn Thode Reenberg , Tobias K. S. Ritschel , John Bagterp Jørgensen

In this paper we will address the problem of developing mathematical models for the numerical simulation of the human circulatory system. In particular, we will focus our attention on the problem of haemodynamics in large human arteries.

Dynamical Systems · Mathematics 2007-05-23 Alfio Quarteroni

A severe application of stress on articular cartilage can initiate a cascade of biochemical reactions that can lead to the development of osteoarthritis. We constructed a multiscale mathematical model of the process with three components:…

Tissues and Organs · Quantitative Biology 2023-02-14 Georgi I. Kapitanov , Xiayi Wang , Bruce P. Ayati , Marc J. Brouillette , James A. Martin

Metabolic pathways describe chains of enzymatic reactions. Their modelling is a key point to understand living systems. An enzymatic reaction is an interaction between one or several metabolites (substrates) and an enzyme (simple protein or…

Subcellular Processes · Quantitative Biology 2009-01-27 Charles Lales , N. Parisey , Jean-Pierre Mazat , Marie Beurton-Aimar

Atherosclerosis is a chronic inflammatory disease occurs due to plaque accumulation in the inner artery wall. In atherosclerotic plaque formation monocytes and macrophages play a significant role in controlling the disease dynamics. In the…

Dynamical Systems · Mathematics 2022-05-31 Debasmita Mukherjee , Sishu Shankar Muni , Hammed Olawale Fatoyinbo

Metabolic heterogeneity is widely recognised as the next challenge in our understanding of non-genetic variation. A growing body of evidence suggests that metabolic heterogeneity may result from the inherent stochasticity of intracellular…

Molecular Networks · Quantitative Biology 2020-10-08 Mona K Tonn , Philipp Thomas , Mauricio Barahona , Diego A Oyarzún

Physiological whole-body models are valuable tools for the development of novel drugs where understanding the system aspects is important. This paper presents a generalized model that encapsulates the structure and flow of whole-body human…

Quantitative Methods · Quantitative Biology 2024-04-23 Laura Hjort Blicher , Peter Emil Carstensen , Jacob Bendsen , Henrik Linden , Bjørn Hald , Kim Kristensen , John Bagterp Jørgensen

Cardiovascular diseases are the leading cause of death. Increased levels of plasma cholesterol are consistently associated with an increased risk of cardiovascular disease. As a result, it is imperative that studies are conducted to…

Quantitative Methods · Quantitative Biology 2024-04-23 Peter Emil Carstensen , Jacob Bendsen , Laura Hjort Blicher , Kim Kristensen , John Bagterp Jørgensen

The metabolic processes complexity is at the heart of energy conversion in living organisms and forms a huge obstacle to develop tractable thermodynamic metabolism models. By raising our analysis to a higher level of abstraction, we develop…

Statistical Mechanics · Physics 2020-06-02 C. Goupil , H. Ouerdane , E. Herbert , Y. D'Angelo , C. Goupil

We extend the lipid-structured model for atherosclerotic plaque development of Ford et al. (2019) to account for macrophage proliferation. Proliferation is modelled as a non-local decrease in the lipid structural variable that is similar to…

Cell Behavior · Quantitative Biology 2022-05-11 Keith L Chambers , Michael G Watson , Mary R Myerscough

We have modeled the metabolic process running in aerobic cells as open nonlinear dissipative systems. The map of metabolic paths and the general scheme of a dissipative system participating in the transformation of steroids are constructed.…

Other Quantitative Biology · Quantitative Biology 2020-06-09 V. I. Grytsay , A. G. Medentsev , A. Yu. Arinbasarova

Motivation: There is a growing need to integrate mechanistic models of biological processes with computational methods in healthcare in order to improve prediction. We apply data assimilation in the context of Type 2 diabetes to understand…

Within a mathematical model, the process of interaction of the metabolic processes such as glycolysis and gluconeogenesis is studied. As a result of the running of two opposite processes in a cell, the conditions for their interaction and…

Other Quantitative Biology · Quantitative Biology 2017-07-19 V. I. Grytsay

Here, we develop a mathematical model for glucose-insulin regulatory system. The model includes a new parameter which is the amount of ingested glucose. Ingested glucose is an external glucose source coming from digested food. We assume…

Tissues and Organs · Quantitative Biology 2020-03-06 Sourav Chowdhury , Sourabh Kumar Manna , Suparna Roychowdhury , Indranath Chaudhuri

A metabolic model can be represented as bipartite graph comprising linked reaction and metabolite nodes. Here it is shown how a network of conserved fluxes can be assigned to the edges of such a graph by combining the reaction fluxes with a…

Molecular Networks · Quantitative Biology 2015-05-13 Patrick B. Warren , Silvio M. Duarte Queiros , Janette L. Jones
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