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We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit…

Algebraic Topology · Mathematics 2021-02-09 Ulrich Bauer , Claudia Landi , Facundo Memoli

Quantifying the similarity between two graphs is a fundamental algorithmic problem at the heart of many data analysis tasks for graph-based data. In this paper, we study the computational complexity of a family of similarity measures based…

Discrete Mathematics · Computer Science 2022-07-04 Timo Gervens , Martin Grohe

Let $G=(V,E)$ be a graph. A $k$-neighborhood in $G$ is a set of vertices consisting of all the vertices at distance at most $k$ from some vertex of $G$. The hypergraph on vertex set $V$ which edge set consists of all the $k$-neighborhoods…

Combinatorics · Mathematics 2014-12-05 Nicolas Bousquet , Stéphan Thomassé

Let $SGL_n(\mathbb{F}_2)$ be the set of all invertible $n\times n$ symmetric matrices over the binary field $\mathbb{F}_2$. Let $\Gamma_n$ be the graph with the vertex set $SGL_n(\mathbb{F}_2)$ where a pair of matrices $\{A,B\}$ form an…

Combinatorics · Mathematics 2024-04-29 Marko Orel , Draženka Višnjić

A mixed graph is obtained from a graph by orienting some of its edges. The Hermitian adjacency matrix of a mixed graph with the vertex set $ \{v_{1}, \ldots , v_{n}\} $, is the matrix $ H=[h_{ij}]_{n \times n} $, where $ h_{ij}=-h_{ji}=i $…

Combinatorics · Mathematics 2018-06-12 S. Akbari , A. Ghafari , M. Nahvi , M. A. Nematollahi

Graph comparison deals with identifying similarities and dissimilarities between graphs. A major obstacle is the unknown alignment of graphs, as well as the lack of accurate and inexpensive comparison metrics. In this work we introduce the…

Machine Learning · Computer Science 2021-12-09 Hermina Petric Maretic , Mireille El Gheche , Giovanni Chierchia , Pascal Frossard

The Steiner distance of a graph, introduced by Chartrand, Oellermann, Tian and Zou in 1989, is a natural generalization of the concept of classical graph distance. For a connected graph $G$ of order at least $2$ and $S\subseteq V(G)$, the…

Combinatorics · Mathematics 2015-11-06 Yaping Mao

Finding the graphs that are most similar to a query graph in a large database is a common task with various applications. A widely-used similarity measure is the graph edit distance, which provides an intuitive notion of similarity and…

Databases · Computer Science 2021-10-05 Franka Bause , David B. Blumenthal , Erich Schubert , Nils M. Kriege

We present an additive $\varepsilon n^{2}$-approximation algorithm for the Graph Edit Distance problem (GED) on graphs of VC dimension $d$ running in time $n^{O(d/\varepsilon^{2})}$. In particular, this recovers a previous result by Arora,…

Data Structures and Algorithms · Computer Science 2026-04-15 Anatole Dahan , Martin Grohe , Daniel Neuen , Tomáš Novotný

Due to their capacity to encode rich structural information, labeled graphs are often used for modeling various kinds of objects such as images, molecules, and chemical compounds. If pattern recognition problems such as clustering and…

Data Structures and Algorithms · Computer Science 2019-08-02 David B. Blumenthal

Among the most important graph parameters is the Diameter, the largest distance between any two vertices. There are no known very efficient algorithms for computing the Diameter exactly. Thus, much research has been devoted to how fast this…

Data Structures and Algorithms · Computer Science 2021-03-31 Arturs Backurs , Liam Roditty , Gilad Segal , Virginia Vassilevska Williams , Nicole Wein

We say that two graphs $H_1,H_2$ on the same vertex set are $G$-creating ($G$-different in other papers, this difference is explained in the introduction) if the union of the two graphs contains $G$ as a subgraph. Let $H(n,k)$ be the…

Combinatorics · Mathematics 2018-01-03 Daniel Soltész

A special case of a theorem of De Bruijn and Erd\H{o}s asserts that any noncollinear set of $n$ points in the plane determines at least $n$ distinct lines. Chen and Chv\'atal conjectured a generalization of this result to arbitrary finite…

Metric Geometry · Mathematics 2015-03-31 Pierre Aboulker , Rohan Kapadia

Linear rank-width is a linearized variation of rank-width, and it is deeply related to matroid path-width. In this paper, we show that the linear rank-width of every $n$-vertex distance-hereditary graph, equivalently a graph of rank-width…

Combinatorics · Mathematics 2015-08-24 Isolde Adler , Mamadou Moustapha Kanté , O-joung Kwon

The graph is one of the most widely used mathematical structures in engineering and science because of its representational power and inherent ability to demonstrate the relationship between objects. The objective of this work is to…

Data Structures and Algorithms · Computer Science 2021-01-01 Shri Prakash Dwivedi

Graph Edit Distance (GED) is a widely used measure of graph similarity, valued for its flexibility in encoding domain knowledge through operation costs. However, existing learning-based approximation methods follow a modeling paradigm that…

Machine Learning · Computer Science 2026-02-26 Zhouyang Liu , Ning Liu , Yixin Chen , Jiezhong He , Shuai Ma , Dongsheng Li

Computing the edit distance of two strings is one of the most basic problems in computer science and combinatorial optimization. Tree edit distance is a natural generalization of edit distance in which the task is to compute a measure of…

Data Structures and Algorithms · Computer Science 2022-09-16 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha , Hamed Saleh

We build a functorial pipeline for persistent homology. The input to this pipeline is a filtered simplicial complex indexed by any finite metric lattice and the output is a persistence diagram defined as the M\"obius inversion of its…

Algebraic Topology · Mathematics 2024-08-29 Alexander McCleary , Amit Patel

The edit distance between strings classically assigns unit cost to every character insertion, deletion, and substitution, whereas the Hamming distance only allows substitutions. In many real-life scenarios, insertions and deletions…

Data Structures and Algorithms · Computer Science 2026-02-23 Elazar Goldenberg , Tomasz Kociumaka , Robert Krauthgamer , Barna Saha

We improve the best known upper bound on the number of edges in a unit-distance graph on $n$ vertices for each $n\in\{16,\ldots,30\}$. When $n\leq 21$, our bounds match the best known lower bounds, and we fully enumerate the densest…

Combinatorics · Mathematics 2025-02-14 Boris Alexeev , Dustin G. Mixon , Hans Parshall
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