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Recently, a first step was made by the authors towards a systematic investigation of the effect of reaction-step-size noise - uncertainty in the step size of the reaction - on the dynamics of stochastic populations. This was done by…

Statistical Mechanics · Physics 2016-12-21 Shay Be'er , Michael Assaf

This study develops and analyzes a stochastic differential equation (SDE) model for the dynamics of hepatitis B virus (HBV) infection. While deterministic frameworks have yielded important insights into viral behavior, they cannot…

Dynamical Systems · Mathematics 2025-10-03 Abdallah Alsammani

We introduce and study a stochastic model for the dynamics of colonial species, which reproduce through fission or fragmentation. The fission rate depends on the relative sizes of colonies in the population, and the growth rate of colonies…

Probability · Mathematics 2025-01-30 Sylvain Billiard , Charles Medous , Charline Smadi

The two-state Togashi-Kaneko model demonstrates how, at finite system sizes, autocatalysis can lead to noise-induced bistability between the cellular concentrations of different molecular species. Here, we show that, in the biologically…

Statistical Mechanics · Physics 2025-07-09 Jeremy R. Worsfold , Richard G. Morris

It is a well established result that, in classical dynamical systems with sufficient time-scale separation, the fast chaotic degrees of freedom are well modeled by (Gaussian) white noise. In this paper, we present the stochastic dynamical…

Statistical Mechanics · Physics 2009-12-06 Jun Chul Park

Transposable elements, or transposons, are DNA sequences that can jump from site to site in the genome during the life cycle of a cell, usually encoding the very enzymes which perform their excision. However, some transposons are parasitic,…

Populations and Evolution · Quantitative Biology 2016-11-16 Chi Xue , Nigel Goldenfeld

The effect of external fluctuations on the formation of spatial patterns is analysed by means of a stochastic Swift-Hohenberg model with multiplicative space-correlated noise. Numerical simulations in two dimensions show a shift of the…

Condensed Matter · Physics 2009-10-28 J. Garcia-Ojalvo , J. M. Sancho

A class of stochastic vector-borne infectious disease models is derived and studied. The class type is determined by a general nonlinear incidence rate of the disease. The disease spreads in a highly random environment with variability from…

Populations and Evolution · Quantitative Biology 2020-05-05 Divine Wanduku

The cloud of cold atoms obtained from a magneto-optical trap is known to exhibit two types of instabilities in the regime of high atomic densities: stochastic instabilities and deterministic instabilities. In the present paper, the…

Atomic Physics · Physics 2009-11-10 Daniel Hennequin

We analyse the effect of intrinsic fluctuations on the properties of bistable stochastic systems with time scale separation operating under1 quasi-steady state conditions. We first formulate a stochastic generalisation of the quasi-steady…

Biological Physics · Physics 2016-03-02 Roberto de la Cruz , Pilar Guerrero , Fabian Spill , Tomás Alarcón

We consider effect of stochastic sources upon self-organization process being initiated with creation of the limit cycle induced by the Hopf bifurcation. General relations obtained are applied to the stochastic Lorenz system to show that…

Statistical Mechanics · Physics 2008-09-30 I A Shuda , S S Borysov , A I Olemskoi

A prototype model of a stochastic one-variable system with a linear restoring force driven by two cross-correlated multiplicative and additive Gaussian white noises was considered earlier [S. I. Denisov et al., Phys. Rev. E 68, 046132…

Statistical Mechanics · Physics 2016-12-13 A. N. Vitrenko

In this paper, we consider the dynamics of a predator-prey system of Gause type with cooperative hunting among predators and Holling III functional response. The known work numerically shows that the system exhibits saddle-node and Hopf…

Dynamical Systems · Mathematics 2021-11-29 Yong Yao , Teng Song , Zuxiong Li

In this paper, we focus on a spatial Holling-type IV predator-prey model which contains some important factors, such as diffusion, noise (random fluctuations) and external periodic forcing. By a brief stability and bifurcation analysis, we…

Populations and Evolution · Quantitative Biology 2008-01-29 Lei Zhang , Weiming Wang , Yakui Xue , Zhen Jin

We demonstrate how to model the toppling activity in avalanching systems by stochastic differential equations (SDEs). The theory is developed as a generalization of the classical mean field approach to sandpile dynamics by formulating it as…

Adaptation and Self-Organizing Systems · Physics 2009-11-13 Martin Rypdal , Kristoffer Rypdal

Demographic noise has profound effects on evolutionary and population dynamics, as well as on chemical reaction systems and models of epidemiology. Such noise is intrinsic and due to the discreteness of the dynamics in finite populations.…

Physics and Society · Physics 2015-05-14 Tobias Galla

The dynamics of a system formed by a finite number $N$ of globally coupled bistable oscillators and driven by external forces is studied focusing on a global variable defined as the arithmetic mean of each oscillator variable. Several…

Statistical Mechanics · Physics 2009-11-13 David Cubero

We investigate a diffusive, stage-structured epidemic model with the maturation delay and freely-moving delay. Choosing delays and diffusive rates as bifurcation parameters, the only possible way to destabilize the endemic equilibrium is…

Dynamical Systems · Mathematics 2018-05-25 Yanfei Du , Ben Niu , Junjie Wei

A deterministic dynamical system that slowly passes through a generic fold-type (saddle-node) bifurcation can be reduced to one-dimensional dynamics close to the bifurcation because of the centre manifold theorem. It is often tacitly…

Dynamical Systems · Mathematics 2024-10-02 Andreas Morr , Niklas Boers , Peter Ashwin

Noise-induced transitions between multistable states happen in a multitude of systems, such as species extinction in biology, protein folding, or tipping points in climate science. Large deviation theory is the rigorous language to describe…

Probability · Mathematics 2024-09-27 Paolo Bernuzzi , Tobias Grafke
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