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Medical image segmentation is vital for clinical diagnosis, yet current deep learning methods often demand extensive expert effort, i.e., either through annotating large training datasets or providing prompts at inference time for each new…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Xingjian Li , Qifeng Wu , Adithya S. Ubaradka , Yiran Ding , Colleen Que , Runmin Jiang , Jianhua Xing , Tianyang Wang , Min Xu

Intrusion Detection Systems (IDS) are key components for securing critical infrastructures, capable of detecting malicious activities on networks or hosts. The procedure of implementing a IDS for Internet of Things (IoT) networks is not…

Cryptography and Security · Computer Science 2021-05-19 Luca Arnaboldi , Charles Morisset

We give an overview of ISINA: INTEGRAL Source Identification Network Algorithm. This machine learning algorithm, using Random Forests, is applied to the IBIS/ISGRI dataset in order to ease the production of unbiased future soft gamma-ray…

Astrophysics · Physics 2008-11-07 S. Scaringi , A. J. Bird , D. J. Clark , A. J. Dean , A. B. Hill , V. A. McBride , S. E. Shaw

As malicious cyber threats become more sophisticated in breaching computer networks, the need for effective intrusion detection systems (IDSs) becomes crucial. Techniques such as Deep Packet Inspection (DPI) have been introduced to allow…

Cryptography and Security · Computer Science 2024-03-28 Kyle Stein , Arash Mahyari , Guillermo Francia , Eman El-Sheikh

A bioinformatics platform is introduced aimed at identifying models of disease-specific pathways, as well as a set of network measures that can quantify changes in terms of global structure or single link disruptions.The approach integrates…

Molecular Networks · Quantitative Biology 2012-01-17 A. Barla , S. Riccadonna , S. Masecchia , M. Squillario , M. Filosi , G. Jurman , C. Furlanello

Untargeted metabolomic studies are revealing large numbers of naturally occurring metabolites that cannot be characterized because their chemical structures and MS/MS spectra are not available in databases. Here we present iMet, a…

Quantitative Methods · Quantitative Biology 2017-03-17 Antoni Aguilar-Mogas , Marta Sales-Pardo , Miriam Navarro , Ralf Tautenhahn , Roger Guimerà , Oscar Yanes

Recall one time when we were in an unfamiliar mall. We might mistakenly think that there exists or does not exist a piece of glass in front of us. Such mistakes will remind us to walk more safely and freely at the same or a similar place…

Computer Vision and Pattern Recognition · Computer Science 2023-04-24 Chengyu Zheng , Peng Li , Xiao-Ping Zhang , Xuequan Lu , Mingqiang Wei

This work proposes an iterative channel estimation, detection and decoding (ICEDD) scheme for the uplink of multi-user multi-antenna systems assisted by multiple reconfigurable intelligent surfaces (RIS)}. A novel iterative code-aided…

Information Theory · Computer Science 2025-12-30 Roberto C. G. Porto , Rodrigo C. de Lamare

Previous divide-and-conquer segmentation analyses of DNA sequences do not provide a satisfactory stopping criterion for the recursion. This paper proposes that segmentation be considered as a model selection process. Using the tools in…

Biological Physics · Physics 2007-05-23 Wentian Li

Identifying operons is a fundamental step in understanding prokaryotic gene regulation, as classifying genes into operons supports the reconstruction of regulatory networks, functional annotation of unannotated genes, and drug candidate…

Genomics · Quantitative Biology 2026-05-13 Akarsh Gupta , Kenneth Rodrigues , Sagnik Chatterjee

Identification of essential genes is one of the ultimate goals of drug designs. Here we introduce an {\it in silico} method to select essential genes through the microarray assay. We construct a graph of genes, called the gene transcription…

Statistical Mechanics · Physics 2007-05-23 K. Rho , H. Jeong , B. Kahng

This methods paper presents computational protocols for the identification of non-coding RNA genes or RNA motifs within genomic sequences. An application to bacterial small RNA is proposed.

Quantitative Methods · Quantitative Biology 2015-12-23 Daniel Gautheret

Electrospray ion-beam deposition (ES-IBD) is a versatile tool to study structure and reactivity of molecules from small metal clusters to large protein assemblies. It brings molecules gently into the gas phase where they can be accurately…

Since it is impossible to predict and identify all the vulnerabilities of a network beforehand, and penetration into a system by malicious intruders cannot always be prevented, intrusion detection systems (IDSs) are essential entities to…

Cryptography and Security · Computer Science 2010-11-13 Jaydip Sen

Most refrigerants currently used in air-conditioning systems, such as hydrofluorocarbons, are potent greenhouse gases and are being phased down. Large-scale molecular screening has been applied to the search for alternatives, but in…

Chemical Physics · Physics 2025-11-24 Adrien Goldszal , Diego Calanzone , Vincent Taboga , Pierre-Luc Bacon

BACKGROUND: One of the most evident achievements of bioinformatics is the development of methods that transfer biological knowledge from characterised proteins to uncharacterised sequences. This mode of protein function assignment is mostly…

Quantitative Methods · Quantitative Biology 2007-09-28 Emmanuel D. Levy , Christos A. Ouzounis , Walter R. Gilks , Benjamin Audit

The high throughput and cost-effectiveness afforded by short-read sequencing technologies, in principle, enable researchers to perform 16S rRNA profiling of complex microbial communities at unprecedented depth and resolution. Existing…

Intercellular heterogeneity serves as both a confounding factor in studying individual clones and an information source in characterizing any heterogeneous tissues, such as blood, tumor systems. Due to inevitable sequencing errors and other…

Genomics · Quantitative Biology 2014-09-30 Guoqiang Yu , Roger R. Wang , Sean S. Wang , Niya Wang , Yue Wang

This work aims at the development of signal processing algorithms that can explore the potential of a PICOSEC-MicroMegas detector and offers the ability for online, precise timing. The PICOSEC-MicroMegas detector is a novel gaseous detector…

Instrumentation and Detectors · Physics 2021-12-30 Alexandra Kallitsopoulou

Recent advancements in Intrusion Detection Systems (IDS), integrating Explainable AI (XAI) methodologies, have led to notable improvements in system performance via precise feature selection. However, a thorough understanding of…

Cryptography and Security · Computer Science 2024-11-06 Hao-Ting Pai , Yu-Hsuan Kang , Wen-Cheng Chung