Related papers: Preprint D\'ej\`a Vu: an FAQ
Software has long been established as an essential aspect of the scientific process in mathematics and other disciplines. However, reliably referencing software in scientific publications is still challenging for various reasons. A crucial…
This is the arXiv index for the electronic proceedings of GD 2023, which contains the peer-reviewed and revised accepted papers with an optional appendix. Proceedings (without appendices) are also to be published by Springer in the Lecture…
The web is often treated as a durable record of institutional and social life, yet in practice it is fragile, revisable, and frequently ephemeral. Domains change, redesigns erase earlier material, institutions relocate, maintainers…
Journal of the History of Biology provides a fifty-year long record for examining the evolution of the history of biology as a scholarly discipline. In this paper, we present a new dataset and preliminary quantitative analysis of the…
This is a Commentary in $Physics~Today$ on the novel review process developed by the biology journal $eLife$, with the suggestion that it be adopted by physics journals.
The importance of datasharing is of increasing concern to funding bodies and institutions. With some prescience, the radiobiology community has established data sharing infrastructures over the last two decades, including STORE; however,…
Novelty is an inherent part of innovations and discoveries. Such processes may be considered as an appearance of new ideas or as an emergence of atypical connections between the existing ones. The importance of such connections hints for…
CERN, the European Organization for Nuclear Research, has operated an institutional preprint repository for more than 10 years. The repository contains over 850,000 records of which more than 450,000 are full-text OA preprints, mostly in…
The definition of scholarly content has expanded to include the data and source code that contribute to a publication. While major archiving efforts to preserve conventional scholarly content, typically in PDFs (e.g., LOCKSS, CLOCKSS,…
The rise and growing popularity of accessible large language models have raised questions about their impact on various aspects of life, including how scientists write and publish their research. The primary objective of this paper is to…
Machine learning is a modern approach to problem-solving and task automation. In particular, machine learning is concerned with the development and applications of algorithms that can recognize patterns in data and use them for predictive…
The purpose of this study is to analyze the research article publishing with special reference to preparing to publish and peer reviewing. Peer reviewing is the process required for standardizing any publications. Manuscript writing is an…
Historical Document Processing is the process of digitizing written material from the past for future use by historians and other scholars. It incorporates algorithms and software tools from various subfields of computer science, including…
In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle analysis. The meeting was attended by 45 experts in data…
We present AUEB's submissions to the BioASQ 6 document and snippet retrieval tasks (parts of Task 6b, Phase A). Our models use novel extensions to deep learning architectures that operate solely over the text of the query and candidate…
Web archives capture the history of the Web and are therefore an important source to study how societal developments have been reflected on the Web. However, the large size of Web archives and their temporal nature pose many challenges to…
An alive publication is a new genre for presenting the results of scientific research, which means that scientific work is published online and then constantly developing and improving by its author. Serious errors and typos are no longer…
The expanding need for an open information sharing infrastructure to promote scholarly communication led to the pioneering establishment of arXiv.org, now maintained by the Cornell University Library. To be sustainable, the repository…
This paper contains results which arose from the research which led to arXiv:1801.10436, but which did not fit in arXiv:1801.10436. So arXiv:1801.10436 contains the highlight results, but there are more results which are interesting enough…
The aim of this survey article is to cover most of the recent research on preopen sets. I try to present majority of the results on preopen sets that I am aware of.