Community recommendations on cryoEM data archiving and validation
Biomolecules
2024-03-07 v3
Abstract
In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle analysis. The meeting was attended by 45 experts in data processing, model building and refinement, validation, and archiving of such structures. This report describes the workshop's motivation and history, the topics discussed, and consensus recommendations resulting from the workshop. Some challenges for future methods-development efforts in this area are also highlighted, as is the implementation to date of some of the recommendations.
Cite
@article{arxiv.2311.17640,
title = {Community recommendations on cryoEM data archiving and validation},
author = {Gerard J. Kleywegt and Paul D. Adams and Sarah J. Butcher and Cathy Lawson and Alexis Rohou and Peter B. Rosenthal and Sriram Subramaniam and Maya Topf and Sanja Abbott and Philip R. Baldwin and John M. Berrisford and Gérard Bricogne and Preeti Choudhary and Tristan I. Croll and Radostin Danev and Sai J. Ganesan and Timothy Grant and Aleksandras Gutmanas and Richard Henderson and J. Bernard Heymann and Juha T. Huiskonen and Andrei Istrate and Takayuki Kato and Gabriel C. Lander and Shee-Mei Lok and Steven J. Ludtke and Garib N. Murshudov and Ryan Pye and Grigore D. Pintilie and Jane S. Richardson and Carsten Sachse and Osman Salih and Sjors H. W. Scheres and Gunnar F. Schroeder and Carlos Oscar S. Sorzano and Scott M. Stagg and Zhe Wang and Rangana Warshamanage and John D. Westbrook and Martyn D. Winn and Jasmine Y. Young and Stephen K. Burley and Jeffrey C. Hoch and Genji Kurisu and Kyle Morris and Ardan Patwardhan and Sameer Velankar},
journal= {arXiv preprint arXiv:2311.17640},
year = {2024}
}
Comments
Outcomes of a wwPDB/EMDB workshop on cryoEM data management, deposition and validation