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Deep learning approaches have achieved state-of-the-art performance in cardiac magnetic resonance (CMR) image segmentation. However, most approaches have focused on learning image intensity features for segmentation, whereas the…

Computer Vision and Pattern Recognition · Computer Science 2019-07-16 Jinming Duan , Ghalib Bello , Jo Schlemper , Wenjia Bai , Timothy J W Dawes , Carlo Biffi , Antonio de Marvao , Georgia Doumou , Declan P O'Regan , Daniel Rueckert

Motivated by the challenging segmentation task of pancreatic tubular networks, this paper tackles two commonly encountered problems in biomedical imaging: Topological consistency of the segmentation, and expensive or difficult annotation.…

Computer Vision and Pattern Recognition · Computer Science 2023-06-29 Kasra Arnavaz , Oswin Krause , Kilian Zepf , Jelena M. Krivokapic , Silja Heilmann , Jakob Andreas Bærentzen , Pia Nyeng , Aasa Feragen

Classification of large and dense networks based on topology is very difficult due to the computational challenges of extracting meaningful topological features from real-world networks. In this paper we present a computationally tractable…

Machine Learning · Computer Science 2022-02-04 Tananun Songdechakraiwut , Bryan M. Krause , Matthew I. Banks , Kirill V. Nourski , Barry D. Van Veen

One of the challenges of full autonomy is to have a robot capable of manipulating its current environment to achieve another environment configuration. This paper is a step towards this challenge, focusing on the visual understanding of the…

Robotics · Computer Science 2020-11-24 Guilherme Maeda , Joni Väätäinen , Hironori Yoshida

This work explores the use of computer vision for image segmentation and classification of medical fluid samples in transparent containers (for example, tubes, syringes, infusion bags). Handling fluids such as infusion fluids, blood, and…

Computer Vision and Pattern Recognition · Computer Science 2021-05-05 Sagi Eppel , Haoping Xu , Alan Aspuru-Guzik

Advances in optical neuroimaging techniques now allow neural activity to be recorded with cellular resolution in awake and behaving animals. Brain motion in these recordings pose a unique challenge. The location of individual neurons must…

Neurons and Cognition · Quantitative Biology 2017-05-22 Jeffrey P. Nguyen , Ashley N. Linder , George S. Plummer , Joshua W. Shaevitz , Andrew M. Leifer

This paper presents to the best of our knowledge the first end-to-end object tracking approach which directly maps from raw sensor input to object tracks in sensor space without requiring any feature engineering or system identification in…

Machine Learning · Computer Science 2016-03-10 Peter Ondruska , Ingmar Posner

Safety-critical infrastructures, such as bridges, are periodically inspected to check for existing damage, such as fatigue cracks and corrosion, and to guarantee the safe use of the infrastructure. Visual inspection is the most frequent…

Computer Vision and Pattern Recognition · Computer Science 2024-03-29 Andrii Kompanets , Remco Duits , Davide Leonetti , Nicky van den Berg , H. H. , Snijder

Network tomography, a classic research problem in the realm of network monitoring, refers to the methodology of inferring unmeasured network attributes using selected end-to-end path measurements. In the research community, network…

Networking and Internet Architecture · Computer Science 2020-01-10 Liang Ma , Ziyao Zhang , Mudhakar Srivatsa

Creating a dataset for training supervised machine learning algorithms can be a demanding task. This is especially true for medical image segmentation since one or more specialists are usually required for image annotation, and creating…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Matheus Viana da Silva , Natália de Carvalho Santos , Julie Ouellette , Baptiste Lacoste , Cesar Henrique Comin

We present a method for automated segmentation of the vasculature in retinal images. The method produces segmentations by classifying each image pixel as vessel or non-vessel, based on the pixel's feature vector. Feature vectors are…

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 João V. B. Soares , Jorge J. G. Leandro , Roberto M. Cesar , Herbert F. Jelinek , Michael J. Cree

During the diagnosis of ischemic strokes, the Circle of Willis and its surrounding vessels are the arteries of interest. Their visualization in case of an acute stroke is often enabled by Computed Tomography Angiography (CTA). Still, the…

Image and Video Processing · Electrical Eng. & Systems 2022-04-27 Florian Thamm , Markus Jürgens , Oliver Taubmann , Aleksandra Thamm , Leonhard Rist , Hendrik Ditt , Andreas Maier

Vessel segmentation of retinal images is a key diagnostic capability in ophthalmology. This problem faces several challenges including low contrast, variable vessel size and thickness, and presence of interfering pathology such as…

Image and Video Processing · Electrical Eng. & Systems 2020-02-19 Venkateswararao Cherukuri , Vijay Kumar BG , Raja Bala , Vishal Monga

We propose a minimal path method to simultaneously compute segmentation masks and extract centerlines of tubular structures with line-topology. Minimal path methods are commonly used for the segmentation of tubular structures in a wide…

Computer Vision and Pattern Recognition · Computer Science 2023-09-19 Wei Liao

Cardiac segmentation of atriums, ventricles, and myocardium in computed tomography (CT) images is an important first-line task for presymptomatic cardiovascular disease diagnosis. In several recent studies, deep learning models have shown…

Image and Video Processing · Electrical Eng. & Systems 2024-10-01 Sanguk Park , Minyoung Chung

Scientists have long sought to understand how vascular networks supply blood and oxygen to cells throughout the body. Recent work focuses on principles that constrain how vessel size changes through branching generations from the aorta to…

Tissues and Organs · Quantitative Biology 2015-09-10 Mitchell G Newberry , Daniel B Ennis , Van M Savage

State-of-the-art image segmentation algorithms generally consist of at least two successive and distinct computations: a boundary detection process that uses local image information to classify image locations as boundaries between objects,…

Computer Vision and Pattern Recognition · Computer Science 2016-11-03 Michał Januszewski , Jeremy Maitin-Shepard , Peter Li , Jörgen Kornfeld , Winfried Denk , Viren Jain

Vascular structures in the retina contain important information for the detection and analysis of ocular diseases, including age-related macular degeneration, diabetic retinopathy and glaucoma. Commonly used modalities in diagnosis of these…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Erick O. Rodrigues , Aura Conci , Panos Liatsis

Tissue tracking in echocardiography is challenging due to the complex cardiac motion and the inherent nature of ultrasound acquisitions. Although optical flow methods are considered state-of-the-art (SOTA), they struggle with long-range…

Computer Vision and Pattern Recognition · Computer Science 2024-05-15 Md Abulkalam Azad , Artem Chernyshov , John Nyberg , Ingrid Tveten , Lasse Lovstakken , Håvard Dalen , Bjørnar Grenne , Andreas Østvik

In recent years, network embedding methods have garnered increasing attention because of their effectiveness in various information retrieval tasks. The goal is to learn low-dimensional representations of vertexes in an information network…

Social and Information Networks · Computer Science 2017-11-02 Chih-Ming Chen , Yi-Hsuan Yang , Yian Chen , Ming-Feng Tsai