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Accurate vascular segmentation is essential for coronary visualization and the diagnosis of coronary heart disease. This task involves the extraction of sparse tree-like vascular branches from the volumetric space. However, existing methods…

Image and Video Processing · Electrical Eng. & Systems 2025-04-21 Bowen Liu , Chunlei Meng , Wei Lin , Hongda Zhang , Ziqing Zhou , Zhongxue Gan , Chun Ouyang

This paper introduces a novel framework for the automated tracking of cells, with a particular focus on the challenging situation of phase contrast microscopic videos. Our framework is based on a topology preserving variational segmentation…

Quantitative Methods · Quantitative Biology 2012-03-28 Michael Moeller , Martin Burger , Peter Dieterich , Albrecht Schwab

Automatic analysis of retinal blood images is of vital importance in diagnosis tasks of retinopathy. Segmenting vessels accurately is a fundamental step in analysing retinal images. However, it is usually difficult due to various imaging…

Computer Vision and Pattern Recognition · Computer Science 2019-02-12 Yishuo Zhang , Albert C. S. Chung

Retinal vascular segmentation, a widely researched topic in biomedical image processing, aims to reduce the workload of ophthalmologists in treating and detecting retinal disorders. Segmenting retinal vessels presents unique challenges;…

Image and Video Processing · Electrical Eng. & Systems 2025-01-06 Melaku N. Getahun , Oleg Y. Rogov , Dmitry V. Dylov , Andrey Somov , Ahmed Bouridane , Rifat Hamoudi

We introduce a data-driven version of the plus Cartan connection on the homogeneous space $\mathbb{M}_2$ of 2D positions and orientations. We formulate a theorem that describes all shortest and straight curves (parallel velocity and…

Differential Geometry · Mathematics 2023-12-11 Nicky van den Berg , Bart Smets , Gautam Pai , Jean-Marie Mirebeau , Remco Duits

Automatic segmentation of retinal blood vessels from fundus images plays an important role in the computer aided diagnosis of retinal diseases. The task of blood vessel segmentation is challenging due to the extreme variations in morphology…

Computer Vision and Pattern Recognition · Computer Science 2016-11-17 Avijit Dasgupta , Sonam Singh

With the advance of fluorescence imaging technologies, recently cell biologists are able to record the movement of protein vesicles within a living cell. Automatic tracking of the movements of these vesicles become key for qualitative…

Quantitative Methods · Quantitative Biology 2015-06-09 Min Xu

Retinal imaging serves as a valuable tool for diagnosis of various diseases. However, reading retinal images is a difficult and time-consuming task even for experienced specialists. The fundamental step towards automated retinal image…

Computer Vision and Pattern Recognition · Computer Science 2020-05-28 Liangzhi Li , Manisha Verma , Yuta Nakashima , Ryo Kawasaki , Hajime Nagahara

Human veins are important for carrying the blood from the body-parts to the heart. The improper functioning of the human veins may arise from several venous diseases. Varicose vein is one such disease wherein back flow of blood can occur,…

Image and Video Processing · Electrical Eng. & Systems 2023-03-22 Maryam Viqar , Violeta Madjarova , Vipul Baghel , Elena Stoykova

The paper presents a new model for single channel images low-level interpretation. The image is decomposed into a graph which captures a complete set of structural features. The description allows to accurately identify every edge location…

Computer Vision and Pattern Recognition · Computer Science 2019-04-23 Alessandro Dal Palu'

Shape graphs are complex geometrical structures commonly found in biological and anatomical systems. A shape graph is a collection of nodes, some connected by curvilinear edges with arbitrary shapes. Their high complexity stems from the…

Computation · Statistics 2024-09-17 Benjamin Beaudett , Anuj Srivastava

Accurate cerebrovascular segmentation from Magnetic Resonance Angiography (MRA) and Computed Tomography Angiography (CTA) is of great significance in diagnosis and treatment of cerebrovascular pathology. Due to the complexity and topology…

Image and Video Processing · Electrical Eng. & Systems 2024-11-22 Zhanqiang Guo , Yao Luan , Jianjiang Feng , Wangsheng Lu , Yin Yin , Guangming Yang , Jie Zhou

The task of parsing subcutaneous vessels in clinical images is often hindered by the high cost and limited availability of ground truth data, as well as the challenge of low contrast and noisy vessel appearances across different patients…

Computer Vision and Pattern Recognition · Computer Science 2026-05-11 Ayaan Nooruddin Siddiqui , Mahnoor Zaidi , Ayesha Nazneen Shahbaz , Priyadarshini Chatterjee , Krishnan Menon Iyer

We introduce a novel framework for learning vector representations of tree-structured geometric data focusing on 3D vascular networks. Our approach employs two sequentially trained Transformer-based autoencoders. In the first stage, the…

Image and Video Processing · Electrical Eng. & Systems 2025-06-16 James Batten , Michiel Schaap , Matthew Sinclair , Ying Bai , Ben Glocker

Whilst grading neurovascular abnormalities is critical for prompt surgical repair, no statistical markers are currently available for predicting the risk of adverse events, such as stroke, and the overall resilience of a network to vascular…

Quantitative Methods · Quantitative Biology 2019-10-30 Stefano Moriconi , Rafael Rehwald , Maria A. Zuluaga , H. Rolf Jäger , Parashkev Nachev , Sébastien Ourselin , M. Jorge Cardoso

Vessel segmentation is an essential task in many clinical applications. Although supervised methods have achieved state-of-art performance, acquiring expert annotation is laborious and mostly limited for two-dimensional datasets with a…

Image and Video Processing · Electrical Eng. & Systems 2021-07-23 Rohit Jena , Sumedha Singla , Kayhan Batmanghelich

Reconstructing Portal Vein and Hepatic Vein trees from contrast enhanced abdominal CT scans is a prerequisite for preoperative liver surgery simulation. Existing deep learning based methods treat vascular tree reconstruction as a semantic…

Computer Vision and Pattern Recognition · Computer Science 2020-09-21 Deepak Keshwani , Yoshiro Kitamura , Satoshi Ihara , Satoshi Iizuka , Edgar Simo-Serra

Retinal vessel segmentation is of great interest for diagnosis of retinal vascular diseases. To further improve the performance of vessel segmentation, we propose IterNet, a new model based on UNet, with the ability to find obscured details…

Image and Video Processing · Electrical Eng. & Systems 2019-12-13 Liangzhi Li , Manisha Verma , Yuta Nakashima , Hajime Nagahara , Ryo Kawasaki

Tight-frame, a generalization of orthogonal wavelets, has been used successfully in various problems in image processing, including inpainting, impulse noise removal, super-resolution image restoration, etc. Segmentation is the process of…

Numerical Analysis · Mathematics 2015-03-19 Xiaohao Cai , Raymond Chan , Serena Morigi , Fiorella Sgallari

The precise delineation of blood vessels in medical images is critical for many clinical applications, including pathology detection and surgical planning. However, fully-automated vascular segmentation is challenging because of the…

Image and Video Processing · Electrical Eng. & Systems 2024-09-20 Amine Sadikine , Bogdan Badic , Enzo Ferrante , Vincent Noblet , Pascal Ballet , Dimitris Visvikis , Pierre-Henri Conze