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The order preserving pattern matching (OPPM) problem is, given a pattern string $p$ and a text string $t$, find all substrings of $t$ which have the same relative orders as $p$. In this paper, we consider two variants of the OPPM problem…

Data Structures and Algorithms · Computer Science 2017-07-26 Temma Nakamura , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Given a text and a pattern over an alphabet, the pattern matching problem searches for all occurrences of the pattern in the text. An equivalence relation $\approx$ is called a substring consistent equivalence relation (SCER), if for two…

Data Structures and Algorithms · Computer Science 2022-07-28 Davaajav Jargalsaikhan , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…

Data Structures and Algorithms · Computer Science 2015-10-01 Srikrishnan Divakaran

Given an indeterminate string pattern $p$ and an indeterminate string text $t$, the problem of order-preserving pattern matching with character uncertainties ($\mu$OPPM) is to find all substrings of $t$ that satisfy one of the possible…

Data Structures and Algorithms · Computer Science 2019-05-08 Diogo Costa , Luís M. S. Russo , Rui Henriques , Hideo Bannai , Alexandre P. Francisco

We introduce a new string matching problem called order-preserving matching on numeric strings where a pattern matches a text if the text contains a substring whose relative orders coincide with those of the pattern. Order-preserving…

Data Structures and Algorithms · Computer Science 2013-02-19 Jinil Kim , Peter Eades , Rudolf Fleischer , Seok-Hee Hong , Costas S. Iliopoulos , Kunsoo Park , Simon J. Puglisi , Takeshi Tokuyama

Given a pattern x of length m and a text y of length n, both over an ordered alphabet, the order-preserving pattern matching problem consists in finding all substrings of the text with the same relative order as the pattern. It is an…

Data Structures and Algorithms · Computer Science 2015-01-19 Simone Faro , Oğuzhan Külekci

Time series are ubiquitous in domains ranging from medicine to marketing and finance. Frequent Pattern Mining (FPM) from a time series has thus received much attention. Recently, it has been studied under the order-preserving (OP) matching…

Data Structures and Algorithms · Computer Science 2024-12-02 Ling Li , Wiktor Zuba , Grigorios Loukides , Solon P. Pissis , Maria Matsangidou

Given a text $T$ and a pattern $P$, the order-preserving matching problem is to find all substrings in $T$ which have the same relative orders as $P$. Order-preserving matching has been an active research area since it was introduced by…

Data Structures and Algorithms · Computer Science 2015-06-18 Myoungji Han , Munseong Kang , Sukhyeun Cho , Geonmo Gu , Jeong Seop Sim , Kunsoo Park

The most fundamental problem considered in algorithms for text processing is pattern matching: given a pattern $p$ of length $m$ and a text $t$ of length $n$, does $p$ occur in $t$? Multiple versions of this basic question have been…

Data Structures and Algorithms · Computer Science 2021-11-10 Moses Ganardi , Paweł Gawrychowski

In this paper, a fully compressed pattern matching problem is studied. The compression is represented by straight-line programs (SLPs), i.e. a context-free grammars generating exactly one string; the term fully means that both the pattern…

Data Structures and Algorithms · Computer Science 2013-06-26 Artur Jeż

We consider the approximate pattern matching problem under the edit distance. Given a text $T$ of length $n$, a pattern $P$ of length $m$, and a threshold $k$, the task is to find the starting positions of all substrings of $T$ that can be…

Data Structures and Algorithms · Computer Science 2022-04-08 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

We study a generalization of the recently introduced order-preserving pattern matching, where instead of looking for an exact copy of the pattern, we only require that the relative order between the elements is the same. In our variant, we…

Data Structures and Algorithms · Computer Science 2014-03-07 Pawel Gawrychowski , Przemyslaw Uznanski

In this paper, we revisit the much studied problem of Pattern Matching with Swaps (Swap Matching problem, for short). We first present a graph-theoretic model, which opens a new and so far unexplored avenue to solve the problem. Then, using…

Data Structures and Algorithms · Computer Science 2013-09-19 Pritom Ahmed , Costas S. Iliopoulos , A. S. M. Sohidull Islam , M. Sohel Rahman

Discovering frequent trends in time series is a critical task in data mining. Recently, order-preserving matching was proposed to find all occurrences of a pattern in a time series, where the pattern is a relative order (regarded as a…

Databases · Computer Science 2022-12-06 Youxi Wu , Xiaoqian Zhao , Yan Li , Lei Guo , Xingquan Zhu , Philippe Fournier-Viger , Xindong Wu

Pattern matching is a fundamental process in almost every scientific domain. The problem involves finding the positions of a given pattern (usually of short length) in a reference stream of data (usually of large length). The matching can…

Data Structures and Algorithms · Computer Science 2022-07-01 Anas Al-okaily , Abdelghani Tbakhi

Recently, order-preserving pattern (OPP) mining, a new sequential pattern mining method, has been proposed to mine frequent relative orders in a time series. Although frequent relative orders can be used as features to classify a time…

Databases · Computer Science 2024-03-08 Youxi Wu , Yufei Meng , Yan Li , Lei Guo , Xingquan Zhu , Philippe Fournier-Viger , Xindong Wu

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…

Data Structures and Algorithms · Computer Science 2020-04-14 Satoshi Kobayashi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

The order-preserving pattern mining can be regarded as discovering frequent trends in time series, since the same order-preserving pattern has the same relative order which can represent a trend. However, in the case where data noise is…

Databases · Computer Science 2023-04-25 Yan Li , Jin Liu , Yingchun Guo , Jing Liu , Youxi Wu

In this work, we consider the problem of pattern matching under the dynamic time warping (DTW) distance motivated by potential applications in the analysis of biological data produced by the third generation sequencing. To measure the DTW…

Data Structures and Algorithms · Computer Science 2022-09-01 Garance Gourdel , Anne Driemel , Pierre Peterlongo , Tatiana Starikovskaya

In the Min-cost Perfect Matching with Delays (MPMD) problem, 2 m requests arrive over time at points of a metric space. An online algorithm has to connect these requests in pairs, but a decision to match may be postponed till a more…

Data Structures and Algorithms · Computer Science 2018-09-11 Marcin Bienkowski , Artur Kraska , Hsiang-Hsuan Liu , Paweł Schmidt
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