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The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…

Data Structures and Algorithms · Computer Science 2020-02-18 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Ayumi Shinohara

The classical pattern matching paradigm is that of seeking occurrences of one string - the pattern, in another - the text, where both strings are drawn from an alphabet set $\Sigma$. Assuming the text length is $n$ and the pattern length is…

Data Structures and Algorithms · Computer Science 2022-07-19 Ora Amir , Amihood Amir , Aviezri Fraenkel , David Sarne

The classical pattern matching asks for locating all occurrences of one string, called the pattern, in another, called the text, where a string is simply a sequence of characters. Due to the potential practical applications, it is desirable…

Data Structures and Algorithms · Computer Science 2024-10-30 Jonas Ellert , Paweł Gawrychowski , Adam Górkiewicz , Tatiana Starikovskaya

A time series is a collection of measurements in chronological order. Discovering patterns from time series is useful in many domains, such as stock analysis, disease detection, and weather forecast. To discover patterns, existing methods…

Databases · Computer Science 2022-02-10 Youxi Wu , Qian Hu , Yan Li , Lei Guo , Xingquan Zhu , Xindong Wu

The $d$-dimensional pattern matching problem is to find an occurrence of a pattern of length $m \times \dots \times m$ within a text of length $n \times \dots \times n$, with $n \ge m$. This task models various problems in text and image…

Quantum Physics · Physics 2015-08-27 Ashley Montanaro

Given a pattern $P$ and a text $T$, both strings over a binary alphabet, the binary jumbled string matching problem consists in telling whether any permutation of $P$ occurs in $T$. The indexed version of this problem, i.e., preprocessing a…

Data Structures and Algorithms · Computer Science 2013-05-09 Emanuele Giaquinta , Szymon Grabowski

In this paper we further investigate the well-studied problem of finding a perfect matching in a regular bipartite graph. The first non-trivial algorithm, with running time $O(mn)$, dates back to K\"{o}nig's work in 1916 (here $m=nd$ is the…

Data Structures and Algorithms · Computer Science 2008-11-18 Ashish Goel , Michael Kapralov , Sanjeev Khanna

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Data Structures and Algorithms · Computer Science 2020-01-03 Timothy M. Chan , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat

The orthogonal matching pursuit (OMP) is one of the mainstream algorithms for sparse data reconstruction or approximation. It acts as a driving force for the development of several other greedy methods for sparse data reconstruction, and it…

Information Theory · Computer Science 2023-03-31 Yun-Bin Zhao , Zhi-Quan Luo

Given a string $T$ of length $N$, the goal of grammar compression is to construct a small context-free grammar generating only $T$. Among existing grammar compression methods, RePair (recursive paring) [Larsson and Moffat, 1999] is notable…

Data Structures and Algorithms · Computer Science 2018-11-06 Kensuke Sakai , Tatsuya Ohno , Keisuke Goto , Yoshimasa Takabatake , Tomohiro I , Hiroshi Sakamoto

Recently Kubica et al. (Inf. Process. Let., 2013) and Kim et al. (submitted to Theor. Comp. Sci.) introduced order-preserving pattern matching. In this problem we are looking for consecutive substrings of the text that have the same "shape"…

We first design an $\mathcal{O}(n^2)$ solution for finding a maximum induced matching in permutation graphs given their permutation models, based on a dynamic programming algorithm with the aid of the sweep line technique. With the support…

Data Structures and Algorithms · Computer Science 2023-06-22 Viet Dung Nguyen , Ba Thai Pham , Phan Thuan Do

Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…

Data Structures and Algorithms · Computer Science 2025-09-04 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

The $k$-mismatch problem consists in computing the Hamming distance between a pattern $P$ of length $m$ and every length-$m$ substring of a text $T$ of length $n$, if this distance is no more than $k$. In many real-world applications, any…

In a seminal paper on finding large matchings in sparse random graphs, Karp and Sipser proposed two algorithms for this task. The second algorithm has been intensely studied, but due to technical difficulties, the first algorithm has…

Combinatorics · Mathematics 2018-11-14 Michael Anastos , Alan Frieze

In this work, we consider pattern matching variants in small space, that is, in the read-only setting, where we want to bound the space usage on top of storing the strings. Our main contribution is a space-time trade-off for the Internal…

Data Structures and Algorithms · Computer Science 2024-04-29 Gabriel Bathie , Panagiotis Charalampopoulos , Tatiana Starikovskaya

The Permutation Pattern Matching problem asks, given two permutations $\sigma$ on $n$ elements and $\pi$, whether $\sigma$ admits a subsequence with the same relative order as $\pi$ (or, in the counting version, how many such subsequences…

Data Structures and Algorithms · Computer Science 2021-08-27 Pawel Gawrychowski , Mateusz Rzepecki

We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…

Data Structures and Algorithms · Computer Science 2011-10-14 Philip Bille , Inge Li Goertz , Hjalte Wedel Vildhøj , David Kofoed Wind

In the $k$-Edit Circular Pattern Matching ($k$-Edit CPM) problem, we are given a length-$n$ text $T$, a length-$m$ pattern $P$, and a positive integer threshold $k$, and we are to report all starting positions of the substrings of $T$ that…

Data Structures and Algorithms · Computer Science 2024-02-23 Panagiotis Charalampopoulos , Solon P. Pissis , Jakub Radoszewski , Wojciech Rytter , Tomasz Waleń , Wiktor Zuba

A fundamental problem in shape matching and geometric similarity is computing the maximum area overlap between two polygons under translation. For general simple polygons, the best-known algorithm runs in $O((nm)^2 \log(nm))$ time [Mount,…

Computational Geometry · Computer Science 2025-11-07 Mikkel Abrahamsen , Sujoy Bhore , Maike Buchin , Jacobus Conradi , Ce Jin , André Nusser , Carolin Rehs