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Many organisms exhibit branching morphologies that twist around each other and become entangled. Entanglement occurs when different objects interlock, creating complex and often irreversible configurations. This physical phenomenon is…

Complexity is a measure of information content. Crystalline materials are not complex systems because their structures can be represented tersely using the language of crystallography. Disordered materials are also structurally simple if…

Disordered Systems and Neural Networks · Physics 2025-09-12 Andrew L. Goodwin

To analyze the evolutionary emergence of structural complexity in physical processes we introduce a general, but tractable, model of objects that interact to produce new objects. Since the objects--\emph{$epsilon$-machines}--have well…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 James P. Crutchfield , Olof Gornerup

Evolutionary complexity is here measured by the number of trials/evaluations needed for evolving a logical gate in a non-linear medium. Behavioural complexity of the gates evolved is characterised in terms of cellular automata behaviour. We…

Neural and Evolutionary Computing · Computer Science 2010-11-23 Andy Adamatzky , Larry Bull

The goals of the astrobiology community are focussed on developing a framework for the detection of biosignatures, or evidence thereof, on objects inside and outside of our solar system. A fundamental aspect of understanding the limits of…

A vast array of transformative technologies developed over the past decade has enabled measurement and perturbation at ever increasing scale, yet our understanding of many systems remains limited by experimental capacity. Overcoming this…

Quantitative Methods · Quantitative Biology 2020-12-25 Brian Cleary , Aviv Regev

Biological living systems in general exhibit complex and diverse dynamics. The latter, in particular, is essential, since diversification increases the odds of survival of an organism while reducing the risk of extinction of the population.…

Probability · Mathematics 2022-08-19 Sandesh Athni Hiremath

The search for a second instance of life is one of the greatest problems of modern science. Outside of creating an artificial origin of life on Earth, the primary targets for the search for life are planets inside or outside the solar…

Earth and Planetary Astrophysics · Physics 2026-03-03 Harrison B. Smith , Lana Sinapayen

Herein we consider various concepts of entropy as measures of the complexity of phenomena and in so doing encounter a fundamental problem in physics that affects how we understand the nature of reality. In essence the difficulty has to do…

Statistical Mechanics · Physics 2007-05-23 Paolo Allegrini , Martina Giuntoli , Paolo Grigolini , Bruce J. West

The volume of data that will be produced by the next generation of astrophysical instruments represents a significant opportunity for making unplanned and unexpected discoveries. Conversely, finding unexpected objects or phenomena within…

Instrumentation and Methods for Astrophysics · Physics 2019-09-11 Gary Segal , David Parkinson , Ray P. Norris , Jesse Swan

The nature and source of evolutionary trends in complexity is difficult to assess from the fossil record, and the driven vs. passive nature of such trends has been debated for decades. There are also questions about how effectively…

Neural and Evolutionary Computing · Computer Science 2011-12-22 Larry Yaeger , Virgil Griffith , Olaf Sporns

The complexity of condensed matter arises from emergent behaviors that cannot be understood by analyzing individual constituents in isolation. While traditional condensed-matter approaches-developed primarily for ideal crystalline…

Materials Science · Physics 2025-09-30 Elisabetta Nocerino

The origins of life stands among the great open scientific questions of our time. While a number of proposals exist for possible starting points in the pathway from non-living to living matter, these have so far not achieved states of…

Populations and Evolution · Quantitative Biology 2017-05-24 Sara I. Walker

The information contained in the genome is insufficient for the control of organism development. Thus, the whereabouts of actual operational directives and workings of the genome remain obscure. In this work, it is suggested that the genome…

Biological Physics · Physics 2007-05-23 S. Y. Berkovich

How best to quantify the information of an object, whether natural or artifact, is a problem of wide interest. A related problem is the computability of an object. We present practical examples of a new way to address this problem. By…

Artificial Intelligence · Computer Science 2011-06-14 Fionn Murtagh

We introduce a method to estimate the complexity function of symbolic dynamical systems from a finite sequence of symbols. We test such complexity estimator on several symbolic dynamical systems whose complexity functions are known exactly.…

Populations and Evolution · Quantitative Biology 2017-01-19 R. Salgado-Garcia , E. Ugalde

For a Bayes classifier whose input space is a graph, we study the structure of the boundary, which comprises those points for which at least one neighbor is classified differently. The scientific setting is assignment of DNA reads produced…

Machine Learning · Statistics 2026-05-28 Alan F. Karr , Zac Bowen , Adam A. Porter , Regina Ruane

This white paper introduces a framework for applying Assembly Theory (AT) to planetary atmospheres as a biosignature framework suitable for the Habitable Worlds Observatory (HWO). AT quantifies the minimum combinatorial complexity required…

Instrumentation and Methods for Astrophysics · Physics 2026-04-07 Sara Walker , Estelle Janin , Evgenya Shkolnik , Louie Slocombe , Leroy Cronin

The dynamic instability of the living systems and the "superposition" of different forms of randomness are viewed as a component of the contingently increasing organization of life along evolution. We briefly survey how classical and…

Other Quantitative Biology · Quantitative Biology 2011-04-07 Marcello Buiatti , Giuseppe Longo

We discuss a characterization of complexity based on successive approximations of the probability density describing a system by means of maximum entropy methods, thereby quantifying the respective role played by different orders of…

Cellular Automata and Lattice Gases · Physics 2014-08-05 Gregor Chliamovitch , Bastien Chopard , Lino Velasquez
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