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We present a concept called the branch-depth of a connectivity function, that generalizes the tree-depth of graphs. Then we prove two theorems showing that this concept aligns closely with the notions of tree-depth and shrub-depth of graphs…

Combinatorics · Mathematics 2020-11-05 Matt DeVos , O-joung Kwon , Sang-il Oum

We introduce priors and algorithms to perform Bayesian inference in Gaussian models defined by acyclic directed mixed graphs. Such a class of graphs, composed of directed and bi-directed edges, is a representation of conditional…

Methodology · Statistics 2012-07-02 Ricardo Silva , Zoubin Ghahramani

This paper studies graphical model selection, i.e., the problem of estimating a graph of statistical relationships among a collection of random variables. Conventional graphical model selection algorithms are passive, i.e., they require all…

Machine Learning · Statistics 2014-04-15 Divyanshu Vats , Robert D. Nowak , Richard G. Baraniuk

Constructions of directed configuration graphs based on a given bi-degree distribution were introduced in random graph theory some years ago. These constructions lead to graphs where the degrees of two nodes belonging to the same edge are…

Probability · Mathematics 2017-01-13 Philippe Deprez , Mario V. Wüthrich

Directed acyclic graphs are a fundamental class of networks that includes citation networks, food webs, and family trees, among others. Here we define a random graph model for directed acyclic graphs and give solutions for a number of the…

Physics and Society · Physics 2009-03-23 Brian Karrer , M. E. J. Newman

We derive standard imsets for undirected graphical models and chain graphical models. Standard imsets for undirected graphical models are described in terms of minimal triangulations for maximal prime subgraphs of the undirected graphs. For…

Statistics Theory · Mathematics 2015-07-28 Takuya Kashimura , Akimichi Takemura

A mixed graph can be seen as a type of digraph containing some edges (two opposite arcs). Here we introduce the concept of sequence mixed graphs, which is a generalization of both sequence graphs and iterated line digraphs. These structures…

Combinatorics · Mathematics 2016-10-13 C. Dalfó , M. A. Fiol , N. López

In the theory of line graphs of undirected graphs there exists an important theorem linking the incidence matrix of the root graph to the adjacency matrix of its line graph. For directed or mixed graphs, however, the exists no analogous…

Combinatorics · Mathematics 2022-05-12 Mohammad Abudayah , Omar Alomari , Torsten Sander

Graph-based semantic representations are valuable in natural language processing, where it is often simple and effective to represent linguistic concepts as nodes, and relations as edges between them. Several attempts has been made to find…

Formal Languages and Automata Theory · Computer Science 2021-05-10 Johanna Björklund , Frank Drewes , Anna Jonsson

Graph transformations definable in logic can be described using the notion of transductions. By understanding transductions as a basic embedding mechanism, which captures the possibility of encoding one graph in another graph by means of…

Combinatorics · Mathematics 2025-01-09 Michał Pilipczuk

Building on work by Desjarlais, Molina, Faase, and others, a general method is obtained for counting the number of spanning trees of graphs that are a product of an arbitrary graph and either a path or a cycle, of which grid graphs are a…

Combinatorics · Mathematics 2008-09-16 Paul Raff

Working with tree graphs is always easier than with loopy ones and spanning trees are the closest tree-like structures to a given graph. We find a correspondence between the solutions of random K-satisfiability problem and those of spanning…

Disordered Systems and Neural Networks · Physics 2009-11-11 A. Ramezanpour , S. Moghimi-Araghi

The classical Matrix-Tree Theorem allows one to list the spanning trees of a graph by monomials in the expansion of the determinant of a certain matrix. We prove that in the case of three-graphs (that is, hypergraphs whose edges have…

Combinatorics · Mathematics 2007-05-23 Gregor Masbaum , Arkady Vaintrob

Constructing a spanning tree of a graph is one of the most basic tasks in graph theory. We consider a relaxed version of this problem in the setting of local algorithms. The relaxation is that the constructed subgraph is a sparse spanning…

Data Structures and Algorithms · Computer Science 2021-04-28 Reut Levi , Dana Ron , Ronitt Rubinfeld

Ordered sequences of univariate or multivariate regressions provide statistical models for analysing data from randomized, possibly sequential interventions, from cohort or multi-wave panel studies, but also from cross-sectional or…

Methodology · Statistics 2015-03-19 Nanny Wermuth , Kayvan Sadeghi

We consider the normalized Laplace operator for directed graphs with positive and negative edge weights. This generalization of the normalized Laplace operator for undirected graphs is used to characterize directed acyclic graphs. Moreover,…

Combinatorics · Mathematics 2012-02-01 Frank Bauer

We consider upward-planar layered drawings of directed graphs, i.e., crossing-free drawings in which each edge is drawn as a y-monotone curve going upward from its tail to its head, and the y-coordinates of the vertices are integers. The…

Computational Geometry · Computer Science 2026-05-04 Patrizio Angelini , Sabine Cornelsen , Giordano Da Lozzo , Fabrizio Frati , Philipp Kindermann , Ignaz Rutter , Johannes Zink

The PageRank is a widely used scoring function of networks in general and of the World Wide Web graph in particular. The PageRank is defined for directed graphs, but in some special cases applications for undirected graphs occur. In the…

Data Structures and Algorithms · Computer Science 2017-02-09 Vince Grolmusz

From any given sequence of finite or infinite graphs, a nonstandard graph is constructed. The procedure is similar to an ultrapower construction of an internal set from a sequence of subsets of the real line, but now the individual entities…

Combinatorics · Mathematics 2007-05-23 A. H. Zemanian

In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…

Discrete Mathematics · Computer Science 2017-09-15 Atsushi Yokoyama