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This paper presents two approaches to quantifying and visualizing variation in datasets of trees. The first approach localizes subtrees in which significant population differences are found through hypothesis testing and sparse classifiers…

Causal structure learning with data from multiple contexts carries both opportunities and challenges. Opportunities arise from considering shared and context-specific causal graphs enabling to generalize and transfer causal knowledge across…

Machine Learning · Computer Science 2024-10-29 Martin Rabel , Wiebke Günther , Jakob Runge , Andreas Gerhardus

Modern wide field radio surveys typically detect millions of objects. Techniques based on machine learning are proving to be useful for classifying large numbers of objects. The self-organizing map (SOM) is an unsupervised machine learning…

Pattern extraction algorithms are enabling insights into the ever-growing amount of today's datasets by translating reoccurring data properties into compact representations. Yet, a practical problem arises: With increasing data volumes and…

Information Retrieval · Computer Science 2018-07-05 Michael Behrisch , Robert Krueger , Fritz Lekschas , Tobias Schreck , Nils Gehlenborg , Hanspeter Pfister

Prior work on perceptual effectiveness has decomposed visualizations into smaller common units (e.g., channels such as angle, position, and length) to establish rankings. While useful, these decompositions lack the computational structure…

Human-Computer Interaction · Computer Science 2026-04-03 Sheng Long , Remco Chang , Eugene Wu , Alex Kale , Matthew Kay

We address the problem of merging graph and feature-space information while learning a metric from structured data. Existing algorithms tackle the problem in an asymmetric way, by either extracting vectorized summaries of the graph…

Machine Learning · Computer Science 2020-02-17 Nicolo Colombo

Background: Symbolic models, particularly decision trees, are widely used in software engineering for explainable analytics in defect prediction, configuration tuning, and software quality assessment. Most of these models rely on…

Software Engineering · Computer Science 2026-02-19 Amirali Rayegan , Tim Menzies

In contrast to objectively measurable aspects (such as accuracy, reading speed, or memorability), the subjective experience of visualizations has only recently gained importance, and we have less experience how to measure it. We explore how…

Human-Computer Interaction · Computer Science 2023-10-24 Laura Koesten , Drew Dimmery , Michael Gleicher , Torsten Möller

Cellular manufacturing (CM) is an approach that includes both flexibility of job shops and high production rate of flow lines. Although CM provides many benefits in reducing throughput times, setup times, work-in-process inventories but the…

Adaptation and Self-Organizing Systems · Physics 2012-01-27 Manojit Chattopadhyay , Pranab K. Dan , Sitanath Majumdar

Texture is one of the most important properties of visual surface that helps in discriminating one object from another or an object from background. The self-organizing map (SOM) is an excellent tool in exploratory phase of data mining. It…

Computer Vision and Pattern Recognition · Computer Science 2014-08-20 Marghny H. Mohamed , Mohammed M. Abdelsamea

We propose a unified view on two widely used data visualization techniques: Self-Organizing Maps (SOMs) and Stochastic Neighbor Embedding (SNE). We show that they can both be derived from a common mathematical framework. Leveraging this…

Machine Learning · Computer Science 2022-05-04 Thibaut Kulak , Anthony Fillion , François Blayo

We present an alternative algorithm to global fitting procedures to construct Parton Distribution Functions (PDFs) parametrizations. The proposed algorithm uses Self-Organizing Maps (SOMs) which at variance with the standard Neural…

High Energy Physics - Phenomenology · Physics 2017-08-23 H. Honkanen , S. Liuti , Y. C. Loitiere , D. Brogan , P. Reynolds

As the request for deep learning solutions increases, the need for explainability is even more fundamental. In this setting, particular attention has been given to visualization techniques, that try to attribute the right relevance to each…

Computer Vision and Pattern Recognition · Computer Science 2021-04-22 Samuele Poppi , Marcella Cornia , Lorenzo Baraldi , Rita Cucchiara

We propose a new method of discovering causal structures, based on the detection of local, spontaneous changes in the underlying data-generating model. We analyze the classes of structures that are equivalent relative to a stream of…

Artificial Intelligence · Computer Science 2013-01-14 Jin Tian , Judea Pearl

This paper adopts and adapts Kohonen's standard Self-Organizing Map (SOM) for exploratory temporal structure analysis. The Self-Organizing Time Map (SOTM) implements SOM-type learning to one-dimensional arrays for individual time units,…

Machine Learning · Computer Science 2014-05-06 Peter Sarlin

We present a conceptually simple and intuitive method to calculate and to measure the dissimilarities among 2D shapes. Several methods to interpret and to visualize the resulting dissimilarity matrix are presented and compared.

Computer Vision and Pattern Recognition · Computer Science 2022-11-10 Karel Zimmermann

The present paper attempts to generate visual clustering and data extraction of cell formation problem using both principal component analysis (PCA) and self organizing map (SOM) from input of sequence based machine-part incidence matrix.…

Adaptation and Self-Organizing Systems · Physics 2012-03-21 Manojit Chattopadhyay , Pranab K. Dan , Sitanath Majumdar

We introduce Ordinal Synchronization ($OS$) as a new measure to quantify synchronization between dynamical systems. $OS$ is calculated from the extraction of the ordinal patterns related to two time series, their transformation into…

Quantitative Methods · Quantitative Biology 2019-01-30 Ignacio Echegoyen , Victor Vera-Ávila , Ricardo Sevilla-Escoboza , Johann H. Martínez , Javier M. Buldú

Recent causal inference literature has introduced causal effect decompositions to quantify sources of observed inequalities or disparities in outcomes, but these approaches are typically limited to pairwise comparisons. In healthcare…

Methodology · Statistics 2026-04-27 Lin Yu , Zhihui Liu , Kathy Han , Olli Saarela

In various data settings, it is necessary to compare observations from disparate data sources. We assume the data is in the dissimilarity representation and investigate a joint embedding method that results in a commensurate representation…

Methodology · Statistics 2016-01-05 Sancar Adali , Carey E. Priebe