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A variety of complex mechanisms, from chemical reaction pathways to active fluctuations, orchestrate molecular transport in intracellular environments. Despite significant recent progress in visualizing and probing these processes, little…

Statistical Mechanics · Physics 2024-07-29 Ardra Suchitran , Sreekanth K Manikandan

A frequency based data-driven control design considering mixed H2/H-infinity control objectives is developed for multiple input-single output systems. The main advantage of the data-driven control over the model-based control is its ability…

Systems and Control · Computer Science 2018-04-11 Omid Bagherieh , Roberto Horowitz

We present a dual-trap optical tweezers setup which directly measures forces using linear momentum conservation. The setup uses a counter-propagating geometry, which allows momentum measurement on each beam separately. The experimental…

Biological Physics · Physics 2013-07-04 Marco Ribezzi Crivellari , Josep M. Huguet , Felix Ritort

Since their invention in the 1980s [1], optical tweezers have found a wide range of applications, from biophotonics and mechanobiology to microscopy and optomechanics [2, 3, 4, 5]. Simulations of the motion of microscopic particles held by…

Optical tweezers are highly versatile laser traps for neutral microparticles, with fundamental applications in physics and in single molecule cell biology. Force measurements are performed by converting the stiffness response to…

Optics · Physics 2014-06-30 R S Dutra , N B Viana , P A Maia Neto , H M Nussenzveig

One of the most intriguing results of single molecule experiments on proteins and nucleic acids is the discovery of functional heterogeneity: the observation that complex cellular machines exhibit multiple, biologically active…

Biomolecules · Quantitative Biology 2022-10-12 Michael Hinczewski , Changbong Hyeon , D. Thirumalai

Optical tweezers constitute pivotal tools in Atomic, Molecular, and Optical(AMO) physics, facilitating precise trapping and manipulation of individual atoms and molecules. This process affords the capability to generate desired geometries…

Atomic Physics · Physics 2024-01-11 Yongwoong Lee , Eunmi Chae

Optical tweezers (OT) have become an essential technique in several fields of physics, chemistry, and biology as precise micromanipulation tools and microscopic force transducers. Quantitative measurements require the accurate calibration…

Multi-step assembly of individual protein building blocks is key to the formation of essential higher-order structures inside and outside of cells. Optical tweezers is a technique well suited to investigate the mechanics and dynamics of…

Biological Physics · Physics 2020-08-18 Kathrin Lehmann , Marjan Shayegan , Gerhard A. Blab , Nancy R. Forde

Optical tweezers find applications in various fields, ranging from biology to physics. One of the fundamental steps necessary to perform quantitative measurements using trapped particles is the calibration of the tweezer's spring constant.…

Quantum Physics · Physics 2020-06-05 Bruno Melo , Felipe Almeida , Guilherme Temporão , Thiago Guerreiro

This article proposes an improved trajectory optimization approach for stochastic optimal control of dynamical systems affected by measurement noise by combining optimal control with maximum likelihood techniques to improve the reduction of…

Systems and Control · Electrical Eng. & Systems 2023-12-25 Prakash Mallick , Zhiyong Chen

Dual trap optical tweezers are often used in high-resolution measurements in single-molecule biophysics. Such measurements can be hindered by the presence of extraneous noise sources, the most prominent of which is the coupling of…

Biological Physics · Physics 2013-07-03 Marco Ribezzi Crivellari , Felix Ritort

Conventional analysis of in vitro assays of motor proteins rests on the assumption that all proteins with the same chemical composition function identically; however molecule-to-molecule variation is often seen even in well-controlled…

By exerting mechanical force it is possible to unfold/refold RNA molecules one at a time. In a small range of forces, an RNA molecule can hop between the folded and the unfolded state with force-dependent kinetic rates. Here, we introduce a…

Biological Physics · Physics 2012-08-27 M. Manosas , J. -D. Wen , P. T. X. Li , S. B. Smith , C. Bustamante , I. Tinoco, , F. Ritort

Optical manipulation in the vicinity of optical micro- and nanofibres has shown potential across several fields in recent years, including microparticle control, and cold atom probing and trapping. To date, most work has focussed on…

The frequency-domain data of a multivariable system in different operating points is used to design a robust controller with respect to the measurement noise and multimodel uncertainty. The controller is fully parametrized in terms of…

Optimization and Control · Mathematics 2017-08-10 Alireza Karimi , Christoph Kammer

High-energy physics experiments face extreme data rates, requiring real-time trigger systems to reduce event throughput while preserving sensitivity to rare processes. Trigger systems are typically constructed as modular chains of…

High Energy Physics - Experiment · Physics 2026-03-10 Noah Clarke Hall , Ioannis Xiotidis , Nikos Konstantinidis , David W. Miller

Squeezing is a resource that enables precision enhancements in quantum metrology and can be used as a basis for the generation of entanglement by linear optics. While strong squeezing is challenging to generate in optical fields, here we…

Quantum Physics · Physics 2021-07-07 F. Cosco , J. S. Pedernales , M. B. Plenio

Force spectroscopy using magnetic tweezers (MT) is a powerful method to probe the physical characteristics of single polymers. Typically, molecules are functionalized for specific attachment to a glass surface at one end and a micron-scale…

Biological Physics · Physics 2021-10-20 Joseph G. Piccolo , Joshua Mendez Harper , Dan Kovari , David Dunlap , Laura Finzi

We investigate unfolding/folding force kinetics in DNA hairpins exhibiting two and three states with newly designed short dsDNA handles (29 bp) using optical tweezers. We show how the higher stiffness of the molecular setup moderately…

Statistical Mechanics · Physics 2011-05-25 N. Forns , S. de Lorenzo , M. Manosas , K. Hayashi , J. M. Huguet , F. Ritort
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