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The large-scale properties of chemical reaction systems, such as the metabolism, can be studied with graph-based methods. To do this, one needs to reduce the information -- lists of chemical reactions -- available in databases. Even for the…

Molecular Networks · Quantitative Biology 2009-09-25 Petter Holme

The present study shows that the performance of CNN is not significantly different from the best classical methods and human doctors for classifying mediastinal lymph node metastasis of NSCLC from PET/CT images. Because CNN does not need…

Computer Vision and Pattern Recognition · Computer Science 2017-02-09 Hongkai Wang , Zongwei Zhou , Yingci Li , Zhonghua Chen , Peiou Lu , Wenzhi Wang , Wanyu Liu , Lijuan Yu

Sophisticated machine learning techniques have promising potential in search for physics beyond Standard Model in Large Hadron Collider (LHC). Convolutional neural networks (CNN) can provide powerful tools for differentiating between…

High Energy Physics - Phenomenology · Physics 2019-12-17 Biplob Bhattacherjee , Swagata Mukherjee , Rhitaja Sengupta

A Multi-hop Control Network (MCN) consists of a plant where the communication between sensor, actuator and computational unit is supported by a wireless multi-hop communication network, and data flow is performed using scheduling and…

Optimization and Control · Mathematics 2011-04-08 Maria D. Di Benedetto , Alessandro D'Innocenzo , Emmanuele Serra

Molecular Communication (MC) is a bio-inspired communication paradigm utilizing molecules for information transfer. Research on this unconventional communication technique has recently started to transition from theoretical investigations…

Emerging Technologies · Computer Science 2023-07-11 Ali Abdali , Murat Kuscu

The abstract mathematical rules of artificial neural network (ANN) are implemented through computation using electronic computers, photonics and in-vitro DNA computation. Here we demonstrate the physical realization of ANN in living…

Biological Physics · Physics 2020-01-06 Kathakali Sarkar , Deepro Bonnerjee , Sangram Bagh

The interaction of phase-separating systems with chemical reactions is of great interest in various contexts, from biology to material science. In biology, phase separation is thought to be the driving force behind the formation of…

Soft Condensed Matter · Physics 2026-01-08 Franco Blanchini , Elisa Franco , Giulia Giordano , Dino Osmanovic

When electrons with energies of $O(100)$ MeV pass through a liquid argon time projection chamber (LArTPC), they deposit energy in the form of electromagnetic showers. Methods to reconstruct the energy of these showers in LArTPCs often rely…

High Energy Physics - Experiment · Physics 2022-02-23 Kiara Carloni , Nicholas W. Kamp , Austin Schneider , Janet M. Conrad

Biochemical reaction networks in living cells usually involve reversible covalent modification of signaling molecules, such as protein phosphorylation. Under conditions of small molecule numbers, as is frequently the case in living cells,…

Molecular Networks · Quantitative Biology 2013-05-29 C. Metzner , M. Sajitz-Hermstein , M. Schmidberger , B. Fabry

AI spans from large language models to tiny models running on microcontrollers (MCUs). Extremely memory-efficient model architectures are decisive to fit within an MCU's tiny memory budget e.g., 128kB of RAM. However, inference latency must…

Machine Learning · Computer Science 2025-10-20 Zhaolan Huang , Emmanuel Baccelli

Carbon nanomembranes (CNMs) are nanometer-thin disordered carbon materials that are suitable for a range of applications, from energy generation and storage, through to water filtration. The structure-property relationships of these…

The formation of self assembled structures such as micelles has been intensively studied and is well understood. The ability of a solution of amphiphilic molecules to develop micelles is depending on the concentration and characterized by…

Soft Condensed Matter · Physics 2019-05-13 Simon Raschke , Andreas Heuer

Multi-cell cooperation (MCC) is an approach for mitigating inter-cell interference in dense cellular networks. Existing studies on MCC performance typically rely on either over-simplified Wyner-type models or complex system-level…

Information Theory · Computer Science 2012-12-07 Kaibin Huang , Jeffrey G. Andrews

A simplified differential reactor model that embodies the essential physics controlling PEM fuel cell (PEM-FC) dynamics is presented. A remarkable analogy exists between water management in the differential PEM-FC and energy balance in the…

Chaotic Dynamics · Physics 2016-09-08 Ee-Sunn J. Chia , Jay B. Benziger , Ioannis G. Kevrekidis

In many state-of-the-art control approaches for power systems with storage units, an explicit model of the storage dynamics is required. With growing numbers of storage units, identifying these dynamics can be cumbersome. This paper employs…

Systems and Control · Electrical Eng. & Systems 2024-07-09 Johannes B. Lipka , Christian A. Hans

Various biological system models have been proposed in systems biology, which are based on the complex biological reactions kinetic of various components. These models are not practical because we lack of kinetic information. In this paper,…

Quantitative Methods · Quantitative Biology 2011-02-19 Weidong Huang , Chundu Wu , Bingjia Xiao , Weidong Xia

Understanding and prediction of the chemical reactions are fundamental demanding in the study of many complex chemical systems. Reactive molecular dynamics (MD) simulation has been widely used for this purpose as it can offer atomic details…

Chemical Physics · Physics 2020-11-12 Jinzhe Zeng , Liqun Cao , Mingyuan Xu , Tong Zhu , John ZH Zhang

Molecular motors are macromolecular complexes which use some form of input energy to perform mechanical work. The filamentary tracks, on which these motors move, are made of either proteins (e.g., microtubules) or nucleic acids (DNA or…

Reconstruction of 3D erythrocyte or red blood cell (RBC) morphology from partial observations, such as microscope images, is essential for understanding the physiology of RBC aging and the pathology of various RBC disorders. In this study,…

Computational Physics · Physics 2025-11-20 Haizhou Wen , He Li , Zhen Li

We demonstrate a class of model nano-electromechanical systems (NEMS) based on multiwalled carbon nanotubes (MWNTs) which has longer inner cores coaxially oscillating inside their respective shorter outer shell holders and can operate at…

Materials Science · Physics 2007-09-26 Quan-shui Zheng , Zhiping Xu , Adrian Neild , Tuck Wah Ng
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