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Graph pattern matching is often defined in terms of subgraph isomorphism, an NP-complete problem. To lower its complexity, various extensions of graph simulation have been considered instead. These extensions allow pattern matching to be…

Databases · Computer Science 2012-01-04 Shuai Ma , Yang Cao , Wenfei Fan , Jinpeng Huai , Tianyu Wo

We initiate the study of computational complexity of graph coverings, aka locally bijective graph homomorphisms, for {\em graphs with semi-edges}. The notion of graph covering is a discretization of coverings between surfaces or topological…

Discrete Mathematics · Computer Science 2025-10-09 Jan Bok , Jiří Fiala , Petr Hliněný , Nikola Jedličková , Jan Kratochvíl

The notion of graph covers (also referred to as locally bijective homomorphisms) plays an important role in topological graph theory and has found its computer science applications in models of local computation. For a fixed target graph…

Discrete Mathematics · Computer Science 2025-02-28 Jan Bok , Jiří Fiala , Nikola Jedličková , Jan Kratochvíl , Micheala Seifrtová

Representing graphs as sets of node embeddings in certain curved Riemannian manifolds has recently gained momentum in machine learning due to their desirable geometric inductive biases, e.g., hierarchical structures benefit from hyperbolic…

Machine Learning · Computer Science 2020-06-09 Calin Cruceru , Gary Bécigneul , Octavian-Eugen Ganea

In this paper we present algorithms for computing the topology of planar and space rational curves defined by a parametrization. The algorithms given here work directly with the parametrization of the curve, and do not require to compute or…

Symbolic Computation · Computer Science 2015-02-17 Juan Gerardo Alcazar , Gema Maria Diaz-Toca

In three-dimensional computational topology, the theory of normal surfaces is a tool of great theoretical and practical significance. Although this theory typically leads to exponential time algorithms, very little is known about how these…

Geometric Topology · Mathematics 2018-10-24 Benjamin A. Burton , João Paixão , Jonathan Spreer

We perform topological data analysis on the internal states of convolutional deep neural networks to develop an understanding of the computations that they perform. We apply this understanding to modify the computations so as to (a) speed…

Machine Learning · Computer Science 2018-11-06 Gunnar Carlsson , Rickard Brüel Gabrielsson

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

A clustering algorithm partitions a set of data points into smaller sets (clusters) such that each subset is more tightly packed than the whole. Many approaches to clustering translate the vector data into a graph with edges reflecting a…

Geometric Topology · Mathematics 2012-06-06 Jesse Johnson

A fundamental characteristic of computer networks is their topological structure. The question of the description of the structural characteristics of computer networks represents a problem that is not completely solved. Search methods for…

Discrete Mathematics · Computer Science 2024-08-08 Carlos E. Frasser

Representation learning on graphs is a fundamental problem that can be crucial in various tasks. Graph neural networks, the dominant approach for graph representation learning, are limited in their representation power. Therefore, it can be…

Machine Learning · Computer Science 2025-01-17 Zuoyu Yan , Qi Zhao , Ze Ye , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

We study finite graphs embedded in oriented surfaces by associating a polynomial to it. The tools used in developing a theory of such graph polynomials are algebraic topological while the polynomial itself is inspired from ideas arising in…

Combinatorics · Mathematics 2022-05-02 Somnath Basu , Dhruv Bhasin , Siddhartha Lal , Siddhartha Patra

We consider the problem of computing the topology and describing the geometry of a parametric curve in $\mathbb{R}^n$. We present an algorithm, PTOPO, that constructs an abstract graph that is isotopic to the curve in the embedding space.…

Symbolic Computation · Computer Science 2022-02-18 Christina Katsamaki , Fabrice Rouillier , Elias Tsigaridas

Computing a morph between two drawings of a graph is a classical problem in computational geometry and graph drawing. While this problem has been widely studied in the context of planar graphs, very little is known about the existence of…

Computational Geometry · Computer Science 2021-05-28 Patrizio Angelini , Michael A. Bekos , Fabrizio Montecchiani , Maximilian Pfister

In this paper we present an implementation of a computer algorithm that automatically determines the topological structure of spacetime, using a branched covering space representation. This algorithm is applied to a few simple examples in…

General Relativity and Quantum Cosmology · Physics 2025-08-13 Christopher L Duston

Graph colouring is a combinatorial optimisation problem with applications in several important domains, including sports scheduling, cartography, street map navigation, and timetabling. It is also of significant theoretical interest and a…

History and Overview · Mathematics 2026-02-23 Rhyd Lewis

An important problem in computational topology is to calculate the homology of a space from samples. In this work, we develop a statistical approach to this problem by calculating the expected rank of an induced map on homology from a…

Computation · Statistics 2023-08-04 Tianyi Sun , Bradley Nelson

Graph Signal Processing deals with the problem of analyzing and processing signals defined on graphs. In this paper, we introduce a novel filtering method for graph-based signals by employing ideas from topological data analysis. We begin…

Signal Processing · Electrical Eng. & Systems 2024-08-27 Matias de Jong van Lier , Sebastián Elías Graiff Zurita , Shizuo Kaji

A graph theoretic perspective is taken for a range of phenomena in continuum physics in order to develop representations for analysis of large scale, high-fidelity solutions to these problems. Of interest are phenomena described by partial…

Computational Physics · Physics 2019-05-22 R. Banerjee , K. Sagiyama , G. H. Teichert , K. Garikipati

Graph embeddings play a critical role in graph representation learning, allowing machine learning models to explore and interpret graph-structured data. However, existing methods often rely on opaque, high-dimensional embeddings, limiting…

Machine Learning · Computer Science 2025-11-26 Astrit Tola , Funmilola Mary Taiwo , Cuneyt Gurcan Akcora , Baris Coskunuzer