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String matching is the problem of finding all the substrings of a text which match a given pattern. It is one of the most investigated problems in computer science, mainly due to its very diverse applications in several fields. Recently,…

Data Structures and Algorithms · Computer Science 2017-07-04 Domenico Cantone , Simone Faro , Arianna Pavone

Graphs provide a natural way to represent data by encoding information about objects and the relationships between them. With the ever-increasing amount of data collected and generated, locating specific patterns of relationships between…

Data Structures and Algorithms · Computer Science 2026-04-28 Tatyana Benko , Rebecca Jones , Lucas Tate

Recent research has shown growing interest in modeling hypergraphs, which capture polyadic interactions among entities beyond traditional dyadic relations. However, most existing methodologies for hypergraphs face significant limitations,…

Methodology · Statistics 2025-11-04 Shihao Wu , Gongjun Xu , Ji Zhu

A new method to identify all sufficiently long repeating substrings in one or several symbol sequences is proposed. The method is based on a specific gauge applied to symbol sequences that guarantees identification of the repeating…

Genomics · Quantitative Biology 2016-04-07 Sergey Tsarev , Michael Sadovsky

We present a new efficient method for approximate search in electronic lexica. Given an input string (the pattern) and a similarity threshold, the algorithm retrieves all entries of the lexicon that are sufficiently similar to the pattern.…

Computation and Language · Computer Science 2015-12-04 Stefan Gerdjikov , Stoyan Mihov , Petar Mitankin , Klaus U. Schulz

We consider the problem of computing distance between a pattern of length $n$ and all $n$-length subwords of a text in the streaming model. In the streaming setting, only the Hamming distance ($L_0$) has been studied. It is known that…

Data Structures and Algorithms · Computer Science 2020-11-10 Tatiana Starikovskaya , Michal Svagerka , Przemysław Uznański

We propose a new method for learning word representations using hierarchical regularization in sparse coding inspired by the linguistic study of word meanings. We show an efficient learning algorithm based on stochastic proximal methods…

Computation and Language · Computer Science 2014-11-07 Dani Yogatama , Manaal Faruqui , Chris Dyer , Noah A. Smith

We investigate the problem of deterministic pattern matching in multiple streams. In this model, one symbol arrives at a time and is associated with one of s streaming texts. The task at each time step is to report if there is a new match…

Data Structures and Algorithms · Computer Science 2012-04-26 Raphael Clifford , Markus Jalsenius , Ely Porat , Benjamin Sach

We investigate a new structure for machine learning classifiers applied to problems in high-energy physics by expanding the inputs to include not only measured features but also physics parameters. The physics parameters represent a…

High Energy Physics - Experiment · Physics 2016-05-25 Pierre Baldi , Kyle Cranmer , Taylor Faucett , Peter Sadowski , Daniel Whiteson

The dictionary matching problem is to locate occurrences of any pattern among a set of patterns in a given text. Massive data sets abound and at the same time, there are many settings in which working space is extremely limited. We…

Data Structures and Algorithms · Computer Science 2013-01-29 Shoshana Marcus Dina Sokol

A decision problem is called parameterized if its input is a pair of strings. One of these strings is referred to as a parameter. The problem: given a propositional logic program P and a non-negative integer k, decide whether P has a stable…

Logic in Computer Science · Computer Science 2007-05-23 Zbigniew Lonc , Miroslaw Truszczynski

Given a text and a pattern over an alphabet, the pattern matching problem searches for all occurrences of the pattern in the text. An equivalence relation $\approx$ is called a substring consistent equivalence relation (SCER), if for two…

Data Structures and Algorithms · Computer Science 2022-07-28 Davaajav Jargalsaikhan , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

In this work we provide a new technique to design fast approximation algorithms for graph problems where the points of the graph lie in a metric space. Specifically, we present a sampling approach for such metric graphs that, using a…

Data Structures and Algorithms · Computer Science 2018-07-26 Hossein Esfandiari , Michael Mitzenmacher

In this work, we study longest common substring, pattern matching, and wildcard pattern matching in the asymmetric streaming model. In this streaming model, we have random access to one string and streaming access to the other one. We…

Data Structures and Algorithms · Computer Science 2021-07-13 Tung Mai , Anup Rao , Ryan A. Rossi , Saeed Seddighin

Subsequence-based time series classification algorithms provide accurate and interpretable models, but training these models is extremely computation intensive. The asymptotic time complexity of subsequence-based algorithms remains a…

Machine Learning · Computer Science 2021-02-18 Atif Raza , Stefan Kramer

Packing several characters into one computer word is a simple and natural way to compress the representation of a string and to speed up its processing. Exploiting this idea, we propose an index for a packed string, based on a {\em sparse…

Data Structures and Algorithms · Computer Science 2015-03-19 Roman Kolpakov , Gregory Kucherov , Tatiana Starikovskaya

Online learning in large-scale structured bandits is known to be challenging due to the curse of dimensionality. In this paper, we propose a unified meta-learning framework for a general class of structured bandit problems where the…

Machine Learning · Computer Science 2022-03-01 Runzhe Wan , Lin Ge , Rui Song

Pattern matching is a powerful tool for symbolic computations, based on the well-defined theory of term rewriting systems. Application domains include algebraic expressions, abstract syntax trees, and XML and JSON data. Unfortunately, no…

Programming Languages · Computer Science 2017-10-20 Manuel Krebber , Henrik Barthels , Paolo Bientinesi

Recently, Cenzato et al.\ proposed a new text index, called the \emph{suffixient array}, which is a subset of the suffix array and supports locating a single pattern occurrence or finding its maximal exact matches (MEMs), assuming random…

Data Structures and Algorithms · Computer Science 2026-05-07 Paola Bonizzoni , Younan Gao , Brian Riccardi

The NP-complete Permutation Pattern Matching problem asks whether a permutation P (the pattern) can be matched into a permutation T (the text). A matching is an order-preserving embedding of P into T. In the Generalized Permutation Pattern…

Computational Complexity · Computer Science 2013-01-15 Marie-Louise Bruner , Martin Lackner
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