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Rooted binary perfect phylogenies provide a generalization of rooted binary unlabeled trees in which each leaf is assigned a positive integer value that corresponds in a biological setting to the count of the number of indistinguishable…

Populations and Evolution · Quantitative Biology 2024-10-22 Chloe E. Shiff , Noah A. Rosenberg

For real polynomials with (sparse) exponents in some fixed set, \[ \Psi(t)=x+y_1t^{k_1}+\ldots +y_L t^{k_L}, \] we analyse the types of root structures that might occur as the coefficients vary. We first establish a stratification of roots…

Classical Analysis and ODEs · Mathematics 2022-04-12 Reuben Wheeler

The polynomials with quaternion coefficients have two kind of roots: isolated and spherical. A spherical root generates a class of roots which contains only one complex number $z$ and its conjugate $\bar{z}$, and this class can be…

Rings and Algebras · Mathematics 2015-01-14 Petroula Dospra , Dimitrios Poulakis

For a tree $T$, the subtree polynomial of $T$ is the generating polynomial for the number of subtrees of $T$. We show that the complex roots of the subtree polynomial are contained in the disk $\left\{z\in\mathbb{C}\colon\ |z|\leq…

Combinatorics · Mathematics 2018-10-23 Jason I. Brown , Lucas Mol

We introduce a new method for showing that the roots of the characteristic polynomial of certain finite lattices are all nonnegative integers. This method is based on the notion of a quotient of a poset which will be developed to explain…

Combinatorics · Mathematics 2015-06-25 Joshua Hallam , Bruce E. Sagan

Some cubic polynomials over the integers have three distinct real roots with continued fractions that all have the same common tail. We characterize the polynomials for which this happens, and then investigate the situation for other…

Number Theory · Mathematics 2015-09-01 Alexandra Hobby , David Hobby

In this paper we first prove that a simple root of a polynomial satisfies the Sendov's conjecture. As the multiple roots trivially satisfy the Sendov's conjecture we conclude that the Sendov's conjecture holds true.

General Mathematics · Mathematics 2019-04-02 Huan Xiao

We prove that finding a rooted subtree with at least $k$ leaves in a digraph is a fixed parameter tractable problem. A similar result holds for finding rooted spanning trees with many leaves in digraphs from a wide family $\cal L$ that…

Data Structures and Algorithms · Computer Science 2007-05-23 Noga Alon , Fedor Fomin , Gregory Gutin , Michael Krivelevich , Saket Saurabh

A gluing of two rooted trees is an identification of their leaves and un-subdivision of the resulting 2-valent vertices. A gluing of two rooted trees is subdivergence free if it has no 2-edge cuts with both roots on the same side of the…

Combinatorics · Mathematics 2025-01-13 Xinle Dai , Jordan Long , Karen Yeats

A proper vertex of a rooted tree with totally ordered vertices is a vertex that is less than all its proper descendants. We count several kinds of labeled rooted trees and forests by the number of proper vertices. Our results are all…

Combinatorics · Mathematics 2013-04-02 Ira M. Gessel , Seunghyun Seo

A normal network is uniquely determined by the set of phylogenetic trees that it displays. Given a set $\mathcal{P}$ of rooted binary phylogenetic trees, this paper presents a polynomial-time algorithm that reconstructs the unique binary…

Combinatorics · Mathematics 2024-07-10 Magnus Bordewich , Simone Linz , Charles Semple

We establish necessary and sufficient conditions for consistent root reconstruction in continuous-time Markov models with countable state space on bounded-height trees. Here a root state estimator is said to be consistent if the probability…

Probability · Mathematics 2019-08-02 Wai-Tong Louis Fan , Sebastien Roch

We present a simple and elementary procedure to sketch the tropical conic given by a degree--two homogeneous tropical polynomial. These conics are trees of a very particular kind. Given such a tree, we explain how to compute a defining…

Algebraic Geometry · Mathematics 2008-10-16 M. Ansola , M. J. de la Puente

In analogy to other concepts of a similar nature, we define the inducibility of a rooted binary tree. Given a fixed rooted binary tree $B$ with $k$ leaves, we let $\gamma(B,T)$ be the proportion of all subsets of $k$ leaves in $T$ that…

Combinatorics · Mathematics 2016-01-27 Éva Czabarka , László A. Székely , Stephan Wagner

We show that the combination of doubling and $(1,p)$-Poincare inequality is equivalent to a version of the $A_p$-condition on rooted K-ary trees.

Metric Geometry · Mathematics 2020-01-01 Khanh Ngoc Nguyen , Zhuang Wang

Given $n \geq 1$, we study the existence of a tree on $n$ vertices whose independence polynomial is symmetric and unimodal as well as the existence of a symmetric and unimodal independence polynomial of degree $n$ of a tree.

Combinatorics · Mathematics 2026-04-22 Takayuki Hibi , Selvi Kara , Dalena Vien

We study a notion of potential isomorphism, where two structures are said to be potentially isomorphic if they are isomorphic in some generic extension that preserves stationary sets and does not add new sets of cardinality less than the…

Logic · Mathematics 2007-05-23 Alex Hellsten , Tapani Hyttinen , Saharon Shelah

We construct parametric families of (monic) reducible polynomials having two roots very close to each other.

Number Theory · Mathematics 2014-05-26 Yann Bugeaud , Andrej Dujella

We explore the relationship between polynomial functors and (rooted) trees. In the first part we use polynomial functors to derive a new convenient formalism for trees, and obtain a natural and conceptual construction of the category…

Category Theory · Mathematics 2014-07-15 Joachim Kock

Let $\mathcal{F}_n$ be the set of unitary polynomials of degree $n \ge 2$ that have their roots in $\mathbb{Z}^*$. We note $$ Q(x) := x^n+a_{1}x^{n-1}+\dots+a_{n}. $$ We show that any two fixed consecutive coefficients $(a_{j},a_{j+1})$ ($j…

Number Theory · Mathematics 2019-11-04 Patrick Letendre