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We show how to learn low-dimensional representations (embeddings) of patient visits from the corresponding electronic health record (EHR) where International Classification of Diseases (ICD) diagnosis codes are removed. We expect that these…

Computers and Society · Computer Science 2018-03-28 Jean-Baptiste Escudié , Alaa Saade , Alice Coucke , Marc Lelarge

Models based on human-understandable concepts have received extensive attention to improve model interpretability for trustworthy artificial intelligence in the field of medical image analysis. These methods can provide convincing…

Computer Vision and Pattern Recognition · Computer Science 2024-12-25 Hongmei Wang , Junlin Hou , Hao Chen

Clinical trials are critical for drug development but often suffer from expensive and inefficient patient recruitment. In recent years, machine learning models have been proposed for speeding up patient recruitment via automatically…

Machine Learning · Computer Science 2023-07-20 Brandon Theodorou , Cao Xiao , Jimeng Sun

While pioneering deep learning methods have made great strides in analyzing electronic health record (EHR) data, they often struggle to fully capture the semantics of diverse medical codes from limited data. The integration of external…

Machine Learning · Computer Science 2024-08-26 Zhihao Yu , Yujie Jin , Yongxin Xu , Xu Chu , Yasha Wang , Junfeng Zhao

We address the fundamental task of inferring cross-document coreference and hierarchy in scientific texts, which has important applications in knowledge graph construction, search, recommendation and discovery. Large Language Models (LLMs)…

Computation and Language · Computer Science 2026-02-04 Lior Forer , Tom Hope

We introduce and address the problem of ad hoc table retrieval: answering a keyword query with a ranked list of tables. This task is not only interesting on its own account, but is also being used as a core component in many other…

Information Retrieval · Computer Science 2018-03-09 Shuo Zhang , Krisztian Balog

Retrieval and content management are assumed to be mutually exclusive. In this paper we suggest that they need not be so. In the usual information retrieval scenario, some information about queries leading to a website (due to `hits' or…

Information Retrieval · Computer Science 2019-08-29 C Ravindranath Chowdary , Anil Kumar Singh , Anil Nelakanti

In medical scenarios, effectively retrieving external knowledge and leveraging it for rigorous logical reasoning is of significant importance. Despite their potential, existing work has predominantly focused on enhancing either retrieval or…

Computation and Language · Computer Science 2026-01-21 Keer Lu , Zheng Liang , Youquan Li , Jiejun Tan , Xili Wang , Da Pan , Shusen Zhang , Guosheng Dong , Bin Cui , Yunhuai Liu , Wentao Zhang

Semantic relevance judgment for search is particularly challenging in knowledge-intensive scenarios, where accurate ranking requires not only semantic matching but also background grounding, multi-step reasoning, and well-calibrated…

Information Retrieval · Computer Science 2026-05-26 Hengjun Jiang , Liansheng Sun , Yan Jiang , Xiaojie Ke , Yongjin Wang , Xiangkun Liu , Cunxin Gu , Jian Xu , Guanjun Jiang

How do we most effectively treat a disease or condition? Ideally, we could consult a database of evidence gleaned from clinical trials to answer such questions. Unfortunately, no such database exists; clinical trial results are instead…

Computation and Language · Computer Science 2020-05-15 Jay DeYoung , Eric Lehman , Ben Nye , Iain J. Marshall , Byron C. Wallace

Many Information Retrieval (IR) models make use of offline statistical techniques to score documents for ranking over a single period, rather than use an online, dynamic system that is responsive to users over time. In this paper, we…

Information Retrieval · Computer Science 2013-03-22 Marc Sloan , Jun Wang

Millions of unsolicited medical inquiries are received by pharmaceutical companies every year. It has been hypothesized that these inquiries represent a treasure trove of information, potentially giving insight into matters regarding…

Our aging population increasingly suffers from multiple chronic diseases simultaneously, necessitating the comprehensive treatment of these conditions. Finding the optimal set of drugs for a combinatorial set of diseases is a combinatorial…

Artificial Intelligence · Computer Science 2016-11-16 Pranjul Yadav , Lisiane Prunelli , Alexander Hoff , Michael Steinbach , Bonnie Westra , Vipin Kumar , Gyorgy Simon

Retrieval systems are central to many NLP pipelines, but often rely on surface-level cues such as keyword overlap and lexical semantic similarity. To evaluate retrieval beyond these shallow signals, recent benchmarks introduce…

Computation and Language · Computer Science 2025-09-26 Zeinab Sadat Taghavi , Ali Modarressi , Yunpu Ma , Hinrich Schütze

In decision-making conversations, experts must navigate complex choices and make on-the-spot decisions while engaged in conversation. Although extensive historical data often exists, the real-time nature of these scenarios makes it…

Human-Computer Interaction · Computer Science 2025-07-15 Mohammad Abolnejadian , Shakiba Amirshahi , Matthew Brehmer , Anamaria Crisan

In contrast to many other domains, recommender systems in health services may benefit particularly from the incorporation of health domain knowledge, as it helps to provide meaningful and personalised recommendations catering to the…

Information Retrieval · Computer Science 2021-06-16 Joel Peito , Qiwei Han

Adapting general-domain retrievers to scientific domains is challenging due to the scarcity of large-scale domain-specific relevance annotations and the substantial mismatch in vocabulary and information needs. Recent approaches address…

Information Retrieval · Computer Science 2026-01-05 Jeyun Lee , Junhyoung Lee , Wonbin Kweon , Bowen Jin , Yu Zhang , Susik Yoon , Dongha Lee , Hwanjo Yu , Jiawei Han , Seongku Kang

Revealing the implicit semantic relation between the constituents of a noun-compound is important for many NLP applications. It has been addressed in the literature either as a classification task to a set of pre-defined relations or by…

Computation and Language · Computer Science 2018-05-08 Vered Shwartz , Ido Dagan

The scoring function, which measures the plausibility of triplets in knowledge graphs (KGs), is the key to ensure the excellent performance of KG embedding, and its design is also an important problem in the literature. Automated machine…

Machine Learning · Computer Science 2021-04-23 Shimin Di , Quanming Yao , Yongqi Zhang , Lei Chen

Applying machine learning in the health care domain has shown promising results in recent years. Interpretable outputs from learning algorithms are desirable for decision making by health care personnel. In this work, we explore the…

Machine Learning · Computer Science 2017-11-30 Marcus Klasson , Kun Zhang , Bo C. Bertilson , Cheng Zhang , Hedvig Kjellström
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