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Sea lice are a threat to the health of both wild and farmed salmon and an economic burden for salmon farms. With a free living larval stage, sea lice can disperse tens of kilometers in the ocean between salmon farms, leading to connected…

Populations and Evolution · Quantitative Biology 2022-06-16 Peter D. Harrington , Danielle L. Cantrell , Michael G. G. Foreman , Ming Guo , Mark A. Lewis

We review a success story regarding Bayesian inference in fisheries management in the Baltic Sea. The management of salmon fisheries is currently based on the results of a complex Bayesian population dynamic model, and managers and…

Methodology · Statistics 2014-05-20 Sakari Kuikka , Jarno Vanhatalo , Henni Pulkkinen , Samu Mäntyniemi , Jukka Corander

Warming oceans due to climate change are leading to increased numbers of ectoparasitic copepods, also known as sea lice, which can cause significant ecological loss to wild salmon populations and major economic loss to aquaculture sites.…

Quantitative Methods · Quantitative Biology 2021-06-25 Ju An Park , Vikram Voleti , Kathryn E. Thomas , Alexander Wong , Jason L. Deglint

We developed an integrated hierarchical Bayesian life cycle model that simultaneously estimates the abundance of post-smolts at sea, post-smolt survival rates, and proportions maturing as 1SW, for all SU in Northern Europe, Southern Europe…

Applications · Statistics 2019-05-03 Etienne Rivot , Maxime Olmos , Gérald Chaput , Etienne Prévost

In this paper we use detailed data about the biology of the head louse (pediculus humanus capitis) to build a model of the evolution of head lice colonies. Using theory and computer simulations, we show that the model can be used to assess…

Populations and Evolution · Quantitative Biology 2015-03-19 María Fabiana Laguna , Sebastián Risau-Gusman

We address the question of how to connect predictions by hydrodynamic models of how sea lice move in water to observable measures that count the number of lice on each fish in a cage in the water. This question is important for management…

Populations and Evolution · Quantitative Biology 2024-11-14 William Waites , Philip Gillibrand , Thomas Adams , Rek Bell , Duncan Guthrie , Tróndur Kragesteen , Crawford Revie , Meadhbh Moriarty

Plasmodium vivax populations are more resistant to malaria control strategies than Plasmodium falciparum, maintaining high genetic diversity and gene flow even at low transmission. To quantify the impact of declining transmission on P.…

Reproductive phenology, growth and mortality rates are key ecological parameters that determine population dynamics and are therefore of vital importance to stock assessment models for fisheries management. In many fish species, the…

Other Quantitative Biology · Quantitative Biology 2020-06-23 Vicenç Moltó , Andres Ospina-Alvarez , Mark Gatt , Miquel Palmer , Ignacio A. Catalán

Prediction of the progression of an infectious disease outbreak is important for planning and coordinating a response. Differential equations are often used to model an epidemic outbreak's behaviour but are challenging to parameterise.…

Populations and Evolution · Quantitative Biology 2022-03-16 David Wu , Helen Petousis-Harris , Janine Paynter , Vinod Suresh , Oliver J. Maclaren

The possibility of spreading by migration, colonizing new spatial domains suitable for development and reproduction, can substantially relieve a biological population from the risk of extinction. By means of a realistic computational model…

Populations and Evolution · Quantitative Biology 2014-12-11 Octavio Cabrera , Damián H. Zanette

Structural health monitoring (SHM) strategies involve the processing of structural response data to indirectly assess an asset's condition. These strategies can be enhanced for a group of structures, especially when they are similar, since…

Simulating the population dynamics of a stage-structured population requires the knowledge of the biodemographic functions characterizing the species, namely development, mortality and fecundity. In general, development and fecundity can…

Populations and Evolution · Quantitative Biology 2020-10-27 Sara Pasquali , Cinzia Soresina , Enrico Marchesini

In the modeling of parasite transmission dynamics, understanding the reproductive characteristics of these parasites is crucial. This paper presents a mathematical model that explores the reproductive behavior of dioecious parasites and its…

Populations and Evolution · Quantitative Biology 2023-05-30 Gonzalo Maximiliano Lopez , Juan Pablo Aparicio

Commonly known as head lice, Pediculus humanus capitis are human ectoparasites which cause infestations in children worldwide. Understanding the life cycle of head lice is an important step in knowing how to treat lice infestations, as the…

Populations and Evolution · Quantitative Biology 2019-09-30 Noemi Castelletti , Maria Vittoria Barbarossa

Summary 1. Infectious disease outbreaks in plants threaten ecosystems, agricultural crops and food trade. Currently, several fungal diseases are affecting forests worldwide, posing a major risk to tree species, habitats and consequently…

Populations and Evolution · Quantitative Biology 2018-12-18 S. Orozco-Fuentes , G. Griffiths , M. J. Holmes , R. Ettelaie , J. Smith , A. W. Baggaley , N. G. Parker

Infectious diseases in livestock are well-known to infect multiple hosts and persist through the combination of within- and between-host transmission pathways. Uncertainty remains about the epidemic consequences of the disease being…

Quantitative Methods · Quantitative Biology 2022-01-17 Nicolas C. Cardenas , Abagael L. Sykes , Francisco P. N. Lopes , Gustavo Machado

This paper is concerned with a stochastic model for the spread of an SEIR (susceptible -> exposed (=latent) -> infective -> removed) epidemic with a contact tracing scheme, in which removed individuals may name some of their infectious…

Probability · Mathematics 2015-12-08 Frank G Ball , Edward S Knock , Philip D O'Neill

Ecological and evolutionary dynamics have been historically regarded as unfolding at broadly separated timescales. However, these two types of processes are nowadays well documented to much more tightly than traditionally assumed,…

Populations and Evolution · Quantitative Biology 2021-11-17 José Camacho Mateu , Matteo Sireci , Miguel A. Muñoz

The increasing demand for aquaculture production necessitates the development of innovative, intelligent tools to effectively monitor and manage fish health and welfare. While non-invasive video monitoring has become a common practice in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-07 Lukas Folkman , Quynh LK Vo , Colin Johnston , Bela Stantic , Kylie A Pitt

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

Probability · Mathematics 2011-01-21 Sylvie Méléard , Sylvie Roelly
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