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We present a novel approach to automating the identification of risk factors for diseases from medical literature, leveraging pre-trained models in the bio-medical domain, while tuning them for the specific task. Faced with the challenges…

Computation and Language · Computer Science 2024-07-11 Maxim Rubchinsky , Ella Rabinovich , Adi Shraibman , Netanel Golan , Tali Sahar , Dorit Shweiki

Understanding causal mechanisms across different populations is essential for designing effective public health interventions. Recently, difference graphs have been introduced as a tool to visually represent causal variations between two…

Artificial Intelligence · Computer Science 2025-02-18 Charles K. Assaad

Doctors often rely on their past experience in order to diagnose patients. For a doctor with enough experience, almost every patient would have similarities to key cases seen in the past, and each new patient could be viewed as a mixture of…

Artificial Intelligence · Computer Science 2018-09-12 Ramin Moghaddass , Cynthia Rudin

This article investigates the critical issue of dataset bias in medical imaging, with a particular emphasis on racial disparities caused by uneven population distribution in dataset collection. Our analysis reveals that medical segmentation…

Computer Vision and Pattern Recognition · Computer Science 2025-01-07 Yixiao Chen , Yue Yao , Ruining Yang , Md Zakir Hossain , Ashu Gupta , Tom Gedeon

Training deep learning models on medical datasets that perform well for all classes is a challenging task. It is often the case that a suboptimal performance is obtained on some classes due to the natural class imbalance issue that comes…

Computer Vision and Pattern Recognition · Computer Science 2022-10-05 Suraj Kothawade , Atharv Savarkar , Venkat Iyer , Lakshman Tamil , Ganesh Ramakrishnan , Rishabh Iyer

The effective extraction of ranked disease-symptom relationships is a critical component in various medical tasks, including computer-assisted medical diagnosis or the discovery of unexpected associations between diseases. While existing…

Information Retrieval · Computer Science 2020-01-16 Markus Zlabinger , Sebastian Hofstätter , Navid Rekabsaz , Allan Hanbury

The comparison of different medical treatments from observational studies or across different clinical studies is often biased by confounding factors such as systematic differences in patient demographics or in the inclusion criteria for…

Methodology · Statistics 2025-05-15 Ekkehard Glimm , Lillian Yau

The paper utilizes the graph embeddings generated for entities of a large biomedical database to perform link prediction to capture various new relationships among different entities. A novel node similarity measure is proposed that…

Information Retrieval · Computer Science 2021-11-01 Prakhar Gurawa , Matthias Nickles

In this paper, the development of a probabilistic network for the diagnosis of acute cardiopulmonary diseases is presented. This paper is a draft version of the article published after peer review in 2018…

Machine Learning · Statistics 2018-05-15 Alessandro Magrini , Davide Luciani , Federico Mattia Stefanini

In the past decade, with the development of big data technology, an increasing amount of patient information has been stored as electronic health records (EHRs). Leveraging these data, various doctor recommendation systems have been…

Information Retrieval · Computer Science 2022-07-14 Luning Bi , Yunlong Wang , Fan Zhang , Zhuqing Liu , Yong Cai , Emily Zhao

An important goal common to domain adaptation and causal inference is to make accurate predictions when the distributions for the source (or training) domain(s) and target (or test) domain(s) differ. In many cases, these different…

Machine Learning · Computer Science 2022-08-31 Sara Magliacane , Thijs van Ommen , Tom Claassen , Stephan Bongers , Philip Versteeg , Joris M. Mooij

Machine learning holds tremendous promise for transforming the fundamental practice of scientific discovery by virtue of its data-driven nature. With the ever-increasing stream of research data collection, it would be appealing to…

Machine Learning · Computer Science 2024-03-06 Jianan Fan , Dongnan Liu , Hang Chang , Heng Huang , Mei Chen , Weidong Cai

Although rare diseases are characterized by low prevalence, approximately 300 million people are affected by a rare disease. The early and accurate diagnosis of these conditions is a major challenge for general practitioners, who do not…

Computation and Language · Computer Science 2021-11-12 Isabel Segura-Bedmar , David Camino-Perdonas , Sara Guerrero-Aspizua

Epidemiologists aiming to model the dynamics of global events face a significant challenge in identifying the factors linked with anomalies such as disease outbreaks. In this paper, we present a novel method for identifying the most…

Machine Learning · Computer Science 2021-09-20 Aboli Marathe , Saloni Parekh , Harsh Sakhrani

For rapidly spreading diseases where many cases show no symptoms, swift and effective contact tracing is essential. While exposure notification applications provide alerts on potential exposures, a fully automated system is needed to track…

Social and Information Networks · Computer Science 2025-01-31 Sofia Hurtado , Radu Marculescu

Children with rare genetic diseases often exhibit distinctive facial phenotypes, yet developing computer vision systems for early diagnosis remains challenging due to extreme data scarcity, privacy constraints, and limited data sharing in…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Ganlin Feng , Yuxi Long , Erin Lou , Lianghong Chen , Zihao Jing , Pingzhao Hu , Wei Xu

Computational text phenotyping is the practice of identifying patients with certain disorders and traits from clinical notes. Rare diseases are challenging to be identified due to few cases available for machine learning and the need for…

Electronic medical records contain multi-format electronic medical data that consist of an abundance of medical knowledge. Facing with patient's symptoms, experienced caregivers make right medical decisions based on their professional…

Databases · Computer Science 2017-07-25 Meng Wang , Jiaheng Zhang , Jun Liu , Wei Hu , Sen Wang , Xue Li , Wenqiang Liu

Undertaking causal inference with observational data is incredibly useful across a wide range of tasks including the development of medical treatments, advertisements and marketing, and policy making. There are two significant challenges…

Machine Learning · Statistics 2022-01-19 Matthew James Vowels , Necati Cihan Camgoz , Richard Bowden

Traditional machine learning algorithms assume that the training and test data have the same distribution, while this assumption does not necessarily hold in real applications. Domain adaptation methods take into account the deviations in…

Machine Learning · Statistics 2019-02-26 Elif Vural