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A message-passing algorithm for counting short cycles in a graph is presented. For bipartite graphs, which are of particular interest in coding, the algorithm is capable of counting cycles of length g, g +2,..., 2g - 2, where g is the girth…
Acyclic and cyclic orientations of an undirected graph have been widely studied for their importance: an orientation is acyclic if it assigns a direction to each edge so as to obtain a directed acyclic graph (DAG) with the same vertex set;…
A graph $G = (V, E)$ is said to be word-representable if a word $w$ can be formed using the letters of the alphabet $V$ such that for every pair of vertices $x$ and $y$, $xy \in E$ if and only if $x$ and $y$ alternate in $w$. A…
A graph is said to be edge-transitive if its automorphism group acts transitively on its edges. It is known that edge-transitive graphs are either vertex-transitive or bipartite. In this paper we present a complete classification of all…
We study the problem of computing a minimum equivalent digraph (also known as the problem of computing a strong transitive reduction) and its maximum objective function variant, with two types of extensions. First, we allow to declare a set…
We consider labeled directed graphs where each vertex is labeled with a non-empty string. Such labeled graphs are also known as non-linear texts in the literature. In this paper, we introduce a new problem of comparing two given labeled…
The Longest Path Problem is a question of finding the maximum length between pairs of vertices of a graph. In the general case, the problem is NP-complete. However, there is a small collection of graph classes for which there exists an…
Given a directed graph, G=(V,E), a path query, path(u,v), returns whether there is a directed path from u to v in G, for u,v vertices in V. Given only V, exactly learning all the edges in G using path queries is often impossible, since path…
We consider the size of the smallest set of vertices required to intersect every longest path in a chordal graph. Such sets are known as longest path transversals. We show that if $\omega(G)$ is the clique number of a chordal graph $G$,…
The modular decomposition of a graph is a canonical representation of its modules. Algorithms for computing the modular decomposition of directed and undirected graphs differ significantly, with the undirected case being simpler, and…
Orienting the edges of an undirected graph such that the resulting digraph satisfies some given constraints is a classical problem in graph theory, with multiple algorithmic applications. In particular, an $st$-orientation orients each edge…
One must add arrows which are forced by transitivity to form the transitive closure of a directed graph. We introduce a construction of a transitive directed graph which is formed by adding vertices instead of arrows and which preserves the…
We analyze the problem of discovering long cycles inside a graph. We propose and test two algorithms for this task. The first one is based on recent advances in statistical mechanics and relies on a message passing procedure. The second…
In observational studies, the true causal model is typically unknown and needs to be estimated from available observational and limited experimental data. In such cases, the learned causal model is commonly represented as a partially…
A mixed graph $G$ is a graph that consists of both undirected and directed edges. An orientation of $G$ is formed by orienting all the undirected edges of $G$, i.e., converting each undirected edge $\{u,v\}$ into a directed edge that is…
Let $G=(V, E)$ be a graph where $V$ and $E$ are the vertex and edge set, respectively. For two disjoint subsets $A$ and $B$, we say $A$ dominates $B$ if every vertex of $B$ is adjacent to at least one vertex of $A$. A vertex partition $\pi…
A directed graph is semi-transitive if and only if it is acyclic and for any directed path $u_1\rightarrow u_2\rightarrow \cdots \rightarrow u_t$, $t \geq 2$, either there is no edge from $u_1$ to $u_t$ or all edges $u_i\rightarrow u_j$…
For a graph $G$, $n$ denotes the order of $G$, $p$ the order of a longest path in $G$ and $c$ the order of a longest cycle. We show that if $G$ is a 2-connected graph such that $d(x)+d(y)+d(z)\ge p+2$ for all triples $x,y,z$ of independent…
IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…
An edge-ordering of a graph $G=(V,E)$ is a bijection $\phi:E\to\{1,2,...,|E|\}$. Given an edge-ordering, a sequence of edges $P=e_1,e_2,...,e_k$ is an increasing path if it is a path in $G$ which satisfies $\phi(e_i)<\phi(e_j)$ for all…