Related papers: Computing Abelian regularities on RLE strings
In this paper we initiate the study of computing a maximal (not necessarily maximum) repeating pattern in a single input string, where the corresponding problems have been studied (e.g., a maximal common subsequence) only in two or more…
Let $X_1, X_2, ..., X_s$ and $Y_1, Y_2, ..., Y_t$ be strings over an alphabet $\Sigma$, where $s$ and $t$ are positive integers. The longest common subsequence and substring problem for multiple strings $X_1, X_2, ..., X_s$ and $Y_1, Y_2,…
The longest square subsequence (LSS) problem consists of computing a longest subsequence of a given string $S$ that is a square, i.e., a longest subsequence of form $XX$ appearing in $S$. It is known that an LSS of a string $S$ of length…
Two finite words $u$ and $v$ are called abelian equivalent if each letter occurs equally many times in both $u$ and $v$. The abelian closure $\mathcal{A}(\mathbf{x})$ of an infinite word $\mathbf{x}$ is the set of infinite words…
This paper investigates the approximability of the Longest Common Subsequence (LCS) problem. The fastest algorithm for solving the LCS problem exactly runs in essentially quadratic time in the length of the input, and it is known that under…
We consider the approximate pattern matching problem under edit distance. In this problem we are given a pattern $P$ of length $w$ and a text $T$ of length $n$ over some alphabet $\Sigma$, and a positive integer $k$. The goal is to find all…
We investigate non-abelian gaugings of WZNW models. When the gauged group is semisimple we are able to present exact formulae for the dual conformal field theory, for all values of the level $k$. The results are then applied to non-abelian…
Given \(k\) strings each of length at most $n$, computing the shortest common supersequence of them is a well-known NP-hard problem (when \(k\) is unbounded). On the other hand, when \(k=2\), such a shortest common supersequence can be…
Two words $w_1$ and $w_2$ are said to be $k$-binomial equivalent if every non-empty word $x$ of length at most $k$ over the alphabet of $w_1$ and $w_2$ appears as a scattered factor of $w_1$ exactly as many times as it appears as a…
We say that an infinite word w is weak abelian periodic if it can be factorized into finite words with the same frequencies of letters. In the paper we study properties of weak abelian periodicity, its relations with balance and frequency.…
The Burrows-Wheeler transform (BWT) is a well studied text transformation widely used in data compression and text indexing. The BWT of two strings can also provide similarity measures between them, based on the observation that the more…
We give a sublinear quantum algorithm for the longest common substring (LCS) problem on the run-length encoded (RLE) inputs, under the assumption that the prefix-sums of the runs are given. Our algorithm costs $\tilde{O}(n^{5/6})\cdot…
It is known that there are infinite words over finite alphabets with Abelian repetition threshold arbitrarily close to 1; however, the construction previously used involves huge alphabets. In this note we give a short cyclic morphism…
We present a generalization of a known fact from combinatorics on words related to periodicity into quasiperiodicity. A string is called periodic if it has a period which is at most half of its length. A string $w$ is called quasiperiodic…
A binary word is Sturmian if the occurrences of each letter are balanced, in the sense that in any two factors of the same length, the difference between the number of occurrences of the same letter is at most 1. In digital geometry,…
Enumerating characteristic substrings (e.g., maximal repeats, minimal unique substrings, and minimal absent words) in a given string has been an important research topic because there are a wide variety of applications in various areas such…
Indexing highly repetitive strings (i.e., strings with many repetitions) for fast queries has become a central research topic in string processing, because it has a wide variety of applications in bioinformatics and natural language…
We study the avoidability of long $k$-abelian-squares and $k$-abelian-cubes on binary and ternary alphabets. For $k=1$, these are M\"akel\"a's questions. We show that one cannot avoid abelian-cubes of abelian period at least $2$ in infinite…
The Longest Common Subsequence (LCS) of two strings is a fundamental string similarity measure with a classical dynamic programming solution taking quadratic time. Despite significant efforts, little progress was made in improving the…
A reduced word of a permutation $w$ is a minimal length expression of $w$ as a product of simple transpositions. We examine the computational complexity, formulas and (randomized) algorithms for their enumeration. In particular, we prove…