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Classical Cellular Automata (CCAs) are a powerful computational framework for modeling global spatio-temporal dynamics with local interactions. While CCAs have been applied across numerous scientific fields, identifying the local rule that…

Systems and Control · Electrical Eng. & Systems 2025-07-01 Faizal Hafiz , Amelia Kunze , Enrico Formenti , Davide La Torre

A coarse-grained cellular automaton is proposed to simulate traffic systems. There, cells represent road sections. A cell can be in two states: jammed or passable. Numerical calculations are performed for a piece of square lattice with open…

Cellular Automata and Lattice Gases · Physics 2015-06-12 Malgorzata J. Krawczyk , Krzysztof Kulakowski

Collective cell migration is crucial to many physiological and pathological processes. Recent experimental studies have indicated that the active traction forces generated by migrating cells in fibrous extracellular matrix (ECM) can…

Soft Condensed Matter · Physics 2020-11-25 Yu Zheng , Qihui Fan , Christopher Eddy , Xiaochen Wang , Bo Sun , Fangfu Ye , Yang Jiao

We employed the VicCA model to investigate the influence of step-edge potential on nucleation and pattern formation, aiming to gain deeper insights into island formation and growth. Our study explores fractal structures governed by general…

Materials Science · Physics 2025-06-12 Marta A. Chabowska , Magdalena A. Załuska-Kotur

For an interacting spatio-temporal lattice system we introduce a formal way of expressing multi-time correlation functions of local observables located at the same spatial point with a time state, i.e. a statistical distribution of…

Statistical Mechanics · Physics 2020-08-20 Katja Klobas , Matthieu Vanicat , Juan P. Garrahan , Tomaž Prosen

We investigate numerically the collective dynamical behavior of pulse-coupled non-leaky integrate-and-fire-neurons that are arranged on a two-dimensional small-world network. To ensure ongoing activity, we impose a probability for…

Computational Physics · Physics 2012-02-15 Alexander Rothkegel , Klaus Lehnertz

Correlations and other collective phenomena in a schematic model of heterogeneous binary agents (individual spin-glass samples) are considered on the complete graph and also on 2d and 3d regular lattices. The system's stochastic dynamics is…

Disordered Systems and Neural Networks · Physics 2014-02-25 Imre Kondor , István Csabai , Gábor Papp , Enys Mones , Gábor Czimbalmos , Máté Csaba Sándor

We present initial results regarding the existence, stability and interaction of linear and nonlinear vibrational modes in a system of two coupled, one dimensional lattices with unequal numbers of masses. The effects on these nonlinear…

Biological Physics · Physics 2007-05-23 Kyle Forinash

Dynamic gene-regulatory networks are complex since the number of potential components involved in the system is very large. Estimating dynamic networks is an important task because they compromise valuable information about interactions…

Methodology · Statistics 2012-05-15 Antonino Abbruzzo , Ernst Wit

I study the Chate-Manneville cellular automata rules on randomly connected lattices. The periodic and quasi-periodic macroscopic behaviours associated with these rules on finite-dimensional lattices persist on an infinite-dimensional…

Condensed Matter · Physics 2009-10-28 Normand Mousseau

Interactions between neighboring cells are essential for generating or refining patterns in a number of biological systems. We propose a discrete filtering approach to predict how networks of cells modulate spatially varying input signals…

Tissues and Organs · Quantitative Biology 2019-02-14 Melinda Liu Perkins , Murat Arcak

The behavior of the ensemble of coupled van der Pol oscillators is abundant when coupling parameters are changed. Incoherent and chimera-like regimes are observed at small values of the coupling strength parameter. Synchronization takes…

Adaptation and Self-Organizing Systems · Physics 2020-07-13 I. A. Shepelev , A. V. Bukh , S. S. Muni , V. S. Anishchenko

The collective dynamics of $N$ weakly coupled processive molecular motors are considered theoretically. We show, using a discrete lattice model, that the velocity-force curves strongly depend on the effective dynamic interactions between…

Subcellular Processes · Quantitative Biology 2009-11-11 O. Campas , Y. Kafri , K. B. Zeldovich , J. Casademunt , J. -F. Joanny

The pattern dynamics of the one-way coupled logistic lattice which can serve as a phenomenological model for open flow is investigated and shown to be extremely rich. For medium and large coupling strengths, we find spatially periodic,…

chao-dyn · Physics 2015-06-24 Frederick H. Willeboordse , Kunihiko Kaneko

The transition to an absorbing phase in a spatiotemporal system is a well-investigated nonequilibrium dynamic transition. The absorbing phase transitions fall into a few universality classes, defined by the critical exponents observed at…

Statistical Mechanics · Physics 2025-09-10 Priyanka D. Bhoyar , Govindan Rangarajan , Prashant M. gade

Cells coexist together in colonies or as tissues. Their behaviour is controlled by an interplay between intercellular forces and biochemical regulation. We develop a simple model of the cell cycle, the fundamental regulatory network…

Biological Physics · Physics 2021-08-04 Jintao Li , Simon K. Schnyder , Matthew S. Turner , Ryoichi Yamamoto

The weighted planar stochastic (WPS) lattice introduces a topological disorder that emerges from a multifractal structure. Its dual network has a power-law degree distribution and is embedded in a two-dimensional space, forming a planar…

Statistical Mechanics · Physics 2024-08-27 Sidiney G. Alves , Silvio C. Ferreira , Marcelo M. de Oliveira

We construct generalized Hofstadter models that possess "color-entangled" flat bands and study interacting many-body states in such bands. For a system with periodic boundary conditions and appropriate interactions, there exist gapped…

Strongly Correlated Electrons · Physics 2015-01-29 Ying-Hai Wu , J. K. Jain , Kai Sun

We study the mathematical properties of a general model of cell division structured with several internal variables. We begin with a simpler and specific model with two variables, we solve the eigenvalue problem with strong or weak…

Analysis of PDEs · Mathematics 2008-10-08 Marie Doumic Jauffret

We present a general method to study weak-coupling instabilities of a large class of interacting electron models in a controlled and unbiased way. Quite generally, the electron gas is unstable towards a superconducting state even in the…

Strongly Correlated Electrons · Physics 2009-11-10 B. Binz , D. Baeriswyl , B. Doucot
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