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We construct a reliable estimation of evolutionary parameters within the Wright-Fisher model, which describes changes in allele frequencies due to selection and genetic drift, from time-series data. Such data exists for biological…

Populations and Evolution · Quantitative Biology 2023-05-26 Juan Guerrero Montero , Richard A. Blythe

Convergence of discrete-time Markov chains with two timescales is a powerful tool to study stochastic evolutionary games in subdivided populations. Focusing on linear games within demes, convergence to a diffusion process for the strategy…

Populations and Evolution · Quantitative Biology 2024-11-05 Sabin Lessard

For multivariant Wright-Fisher models in population genetics, we introduce equilibrium states, expressed by fluctuations of probability ratio, in contrast to the traditionally used fluctuations, expressed by the difference between the…

Statistics Theory · Mathematics 2020-08-04 D. Koroliouk , V. S. Koroliuk

We study the large population limit of the Moran process, assuming weak-selection, and for different scalings. Depending on the particular choice of scalings, we obtain a continuous model that may highlight the genetic-drift (neutral…

Populations and Evolution · Quantitative Biology 2013-01-21 Fabio A. C. C. Chalub , Max O. Souza

Reinforced Galton--Watson processes describe the dynamics of a population where reproduction events are reinforced, in the sense that offspring numbers of forebears can be repeated randomly by descendants. More specifically, the evolution…

Probability · Mathematics 2025-02-24 Jean Bertoin , Bastien Mallein

We derive a unified stochastic picture for the duality of a resampling-selection model with a branching-coalescing particle process (cf. http://www.ams.org/mathscinet-getitem?mr=MR2123250) and for the self-duality of Feller's branching…

Probability · Mathematics 2009-04-16 Roland Alkemper , Martin Hutzenthaler

We describe a continuous-time modelling framework for biological population dynamics that accounts for demographic noise. In the spirit of the methodology used by statistical physicists, transitions between the states of the system are…

Populations and Evolution · Quantitative Biology 2018-07-19 George W. A. Constable , Alan J. McKane

We analyse the impact of the selective pressure for the global optimisation capabilities of steady-state EAs. For the standard bimodal benchmark function \twomax we rigorously prove that using uniform parent selection leads to exponential…

Neural and Evolutionary Computing · Computer Science 2021-03-19 Dogan Corus , Andrei Lissovoi , Pietro S. Oliveto , Carsten Witt

We study a class of Cannings models with population size $N$ having a mixed multinomial offspring distribution with random success probabilities $W_1,\ldots,W_N$ induced by independent and identically distributed positive random variables…

Probability · Mathematics 2021-10-01 Thierry Huillet , Martin Möhle

Wright-Fisher diffusions describe the evolution of the type composition of an infinite haploid population with two types (say type $0$ and type $1$) subject to neutral reproductions, and possibly selection and mutations. In the present…

Probability · Mathematics 2022-12-21 Grégoire Véchambre

We consider a population model where individuals behave independently from each other and whose genealogy is described by a chronological tree called splitting tree. The individuals have i.i.d. (non-exponential) lifetime durations and give…

Probability · Mathematics 2014-05-20 Mathieu Richard

The results in this paper provide new information on asymptotic properties of classical models: the neutral Kingman coalescent under a general finite-alleles, parent-dependent mutation mechanism, and its generalisation, the ancestral…

Probability · Mathematics 2022-07-08 Martina Favero , Henrik Hult

The dynamics of adaptation is difficult to predict because it is highly stochastic even in large populations. The uncertainty emerges from number fluctuations, called genetic drift, arising in the small number of particularly fit…

Populations and Evolution · Quantitative Biology 2015-06-30 Oskar Hallatschek , Lukas Geyrhofer

We consider a population growth model given by a two-type continuous-state branching process with immigration and competition, introduced by Ma. We study the relative frequency of one of the types in the population when the total mass is…

Probability · Mathematics 2024-06-07 Imanol Nuñez , José Luis Pérez

Consider a branching Markov process with values in some general type space. Conditional on survival up to generation $N$, the genealogy of the extant population defines a random marked metric measure space, where individuals are marked by…

Probability · Mathematics 2023-07-12 Félix Foutel-Rodier , Emmanuel Schertzer

We consider a meanfield system of interacting Fisher-Wright diffusions with selection and rare mutation on the geographic space $\{1,2,...,N\}$. The type 1 has fitness 0, type 2 has fitness 1 and (rare) mutation occurs from type 1 to 2 at…

Probability · Mathematics 2011-04-05 Donald A. Dawson , Andreas Greven

We discuss two cases that can be connected to the dynamics of interacting populations: (I.) density waves for the case or negligible random fluctuations of the populations densities, and (II.) probability distributions connected to the…

Mathematical Physics · Physics 2013-04-05 Nikolay K. Vitanov , Zlatinka I. Dimitrova , Kaloyan N. Vitanov

The role of the selection pressure and mutation amplitude on the behavior of a single-species population evolving on a two-dimensional lattice, in a periodically changing environment, is studied both analytically and numerically. The…

Populations and Evolution · Quantitative Biology 2009-11-13 Ioana Bena , Michel Droz , Janusz Szwabinski , Andrzej Pekalski

The correlation among the gene genealogies at different loci is crucial in biology, yet challenging to understand because such correlation depends on many factors including genetic linkage, recombination, natural selection and population…

Probability · Mathematics 2023-10-20 David Kogan , Dimitrios Diamantidis , John Wakeley , Wai-Tong Louis Fan

Conditions for almost sure extinction are studied in discrete time branching processes with an infinite number of types. It is not assumed that the expected number of children is a bounded function of the parent's type. There might also be…

Probability · Mathematics 2007-05-23 G. T. Tetzlaff