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We consider the effect of Gaussian white noise on fast-slow dynamical systems with one fast and two slow variables, containing a folded-node singularity. In the absence of noise, these systems are known to display mixed-mode oscillations,…

Dynamical Systems · Mathematics 2012-02-20 Nils Berglund , Barbara Gentz , Christian Kuehn

A recent study on the effect of colored driving noise on the escape from a metastable state derives an analytic expression of the transfer function of the leaky integrate-and-fire neuron model subject to colored noise. Here we present an…

Neurons and Cognition · Quantitative Biology 2015-10-14 Jannis Schuecker , Markus Diesmann , Moritz Helias

We study the influence of off-diagonal harmonic noise on transitions in a Landau-Zener model. We demonstrate that the harmonic noise can change the transition probabilities substantially and that its impact depends strongly on the…

Quantum Physics · Physics 2015-03-13 Matthias Kraft , Stephan Burkhardt , Riccardo Mannella , Sandro Wimberger

Gene expression is a fundamental process in a living system. The small RNAs (sRNAs) is widely observed as a global regulator in gene expression. The inherent nonlinearity in this regulatory process together with the bursty production of…

Molecular Networks · Quantitative Biology 2021-10-12 Shigang Qiu , Tao Jia

The overdamped motion of a Brownian particle in randomly switching piece-wise metastable linear potential shows noise enhanced stability (NES): the noise stabilizes the metastable system and the system remains in this state for a longer…

Statistical Mechanics · Physics 2009-11-10 B. Spagnolo , A. A. Dubkov , N. V. Agudov

Intrinsic or demographic noise has been shown to play an important role in the dynamics of a variety of systems including predator-prey populations, intracellular biochemical reactions, and oscillatory chemical reaction systems, and is…

Statistical Mechanics · Physics 2013-03-14 C. Michael Giver , Bulbul Chakraborty

Expression of many genes varies as a cell transitions through different cell-cycle stages. How coupling between stochastic expression and cell cycle impacts cell-to-cell variability (noise) in the level of protein is not well understood. We…

Molecular Networks · Quantitative Biology 2016-05-10 Mohammad Soltani , Abhyudai Singh

We report on the effect of noise on the characteristics of the bistable polariton emission system. The present experiment provides a time resolved access to the polariton emission intensity. We evidence the noise-induced transitions between…

Mesoscale and Nanoscale Physics · Physics 2015-10-28 H. Abbaspour , G. Sallen , S. Trebaol , F. Morier-Genoud , M. T. Portella-Oberli , B. Deveaud

Noise in gene expression, either due to inherent stochasticity or to varying inter- and intracellular environment, can generate significant cell-to-cell variability of protein levels in clonal populations. We present a theoretical…

Other Quantitative Biology · Quantitative Biology 2010-04-08 Julia Rausenberger , Christian Fleck , Jens Timmer , Markus Kollmann

We derive exact solutions of simplified models for the temporal evolution of the protein concentration within a cell population arbitrarily far from the stationary state. We show that monitoring the dynamics can assist in modeling and…

Biomolecules · Quantitative Biology 2015-05-13 Sandro Azaele , Jayanth R. Banavar , Amos Maritan

The constituents in a class of active matter systems change their directions of motion by being influenced by the velocities of the neighbors. Such systems may undergo phase transitions, with respect to ordering in the velocity field, as…

Statistical Mechanics · Physics 2025-02-11 Sohini Chatterjee , Sohom Das , Purnendu Pathak , Tanay Paul , Subir K. Das

Intrinsic transcriptional noise induced by operator fluctuations is investigated with a simple spin like stochastic model. The effects of transcriptional fluctuations in protein synthesis is probed by coupling transcription and translation…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Guilherme da C. P. Innocentini , Jose E. M. Hornos

A new type of noised-induced phase transitions that should occur in systems of elements with motivated behavior is considered. By way of an example, a simple oscillatory system {x,v} with additive white noise is analyzed numerically. A…

Soft Condensed Matter · Physics 2007-05-23 Ihor Lubashevsky , Morteza Hajimahmoodzadeh , Albert Katsnelson , Peter Wagner

Extrinsic noise-induced transitions to bimodal dynamics have been largely investigated in a variety of chemical, physical, and biological systems. In the standard approach in physical and chemical systems, the key properties that make these…

Biological Physics · Physics 2020-11-10 Gerardo Aquino , Andrea Rocco

The time taken for gene expression varies not least because proteins vary in length considerably. This paper uses an abstract, tuneable Boolean regulatory network model to explore gene expression time variation. In particular, it is shown…

Biomolecules · Quantitative Biology 2016-03-16 Larry Bull

Noise induced changes in the critical and oscillatory behavior of a Prey-Predator system are studied using power spectrum density and Spectral Amplification Factor (SAF) analysis. In the absence of external noise, the population densities…

Statistical Mechanics · Physics 2009-10-31 A. F. Rozenfeld , C. J. Tessone , E. Albano , H. S. Wio

Recent advances in sleep neurobiology have allowed development of physiologically based mathematical models of sleep regulation that account for the neuronal dynamics responsible for the regulation of sleep-wake cycles and allow detailed…

Biological Physics · Physics 2012-09-25 Marco Patriarca , Svetlana Postnova , Hans A. Braun , Emilio Hernández-García , Raúl Toral

We experimentally investigate the escape from a metastable state over a fluctuating barrier of a physical system. The system is switching between two states under electronic control of a dichotomous noise. We measure the escape time and its…

Statistical Mechanics · Physics 2009-10-31 Rosario N. Mantegna , Bernardo Spagnolo

This paper investigates the impact of control field noise on the optimal manipulation of quantum dynamics. Simulations are performed on several multilevel quantum systems with the goal of population transfer in the presence of significant…

Chemical Physics · Physics 2009-11-11 Feng Shuang , Herschel Rabitz

We consider rare transitions induced by colored noise excitation in multistable systems. We show that undesirable transitions can be mitigated by a simple time-delay feedback control if the control parameters are judiciously chosen. We…

Dynamical Systems · Mathematics 2021-09-15 Konstantinos Mamis , Mohammad Farazmand
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