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This paper investigates the motion of falling leaves through modeling using papers and the corresponding data collected from more than four thousands experiments. Two series of experiments were designed in order to study the relationship…

Popular Physics · Physics 2011-11-11 Pedram Razavi

A new model for biological growth is introduced that couples the geometry of an organism (or part of the organism) to the flow and deposition of material. The model has three dynamical variables (a) a Riemann metric tensor for the geometry,…

Biological Physics · Physics 2010-10-05 Julia Pulwicki , David Hobill

Tip-driven growth processes underlie the development of many plants. To date, tip-driven growth processes have been modelled as an elongating path or series of segments without taking into account lateral expansion during elongation.…

Biological Physics · Physics 2014-01-24 Alexander Bucksch , Greg Turk , Joshua S. Weitz

We model evolution of plants in a world, made up of different locations, with multiple environments (mutually exclusive and collectively exhaustive subsets of locations). Each environment (landmass) has temperature, rainfall, and other…

Populations and Evolution · Quantitative Biology 2019-05-27 Alexander , Khazatsky , Albert Yu , Zihao Zhao , Gabe Zuckerman

Coordinated cellular movements are key processes in tissue morphogenesis. Using a cell-based modeling approach we study the dynamics of epithelial layers lining surfaces with constant and varying curvature. We demonstrate that extrinsic…

Soft Condensed Matter · Physics 2024-03-21 Lea Happel , Axel Voigt

The self-organization of cells into complex tissues relies on a tight coordination of cell behavior. Identifying the cellular processes driving tissue growth is key to understanding the emergence of tissue forms and devising targeted…

Quantitative Methods · Quantitative Biology 2024-03-27 Ruslan Mukhamadiarov , Matteo Ciarchi , Fabrizio Olmeda , Steffen Rulands

We present a classical conformal field theory on an arbitrary two-dimensional spacetime background. The dynamical object is a space-filling string, and the evolution may be thought as occurring on the manifold of the conformal group. The…

High Energy Physics - Theory · Physics 2016-01-12 Claudio Bunster , Alfredo Perez

In this paper we study planar morphs between straight-line planar grid drawings of trees. A morph consists of a sequence of morphing steps, where in a morphing step vertices move along straight-line trajectories at constant speed. We show…

In this article, we propose a general framework to study the dynamics and topology of cellular networks that capture the geometry of cell packings in two-dimensional tissues. Such epithelia undergo large-scale deformation during…

Tissues and Organs · Quantitative Biology 2017-09-08 Matthias Merkel , Raphaël Etournay , Marko Popović , Guillaume Salbreux , Suzanne Eaton , Frank Jülicher

Understanding the rules underlying organismal development is a major unsolved problem in biology. Each cell in a developing organism responds to signals in its local environment by dividing, excreting, consuming, or reorganizing, yet how…

Cell Behavior · Quantitative Biology 2025-08-20 Ramya Deshpande , Francesco Mottes , Ariana-Dalia Vlad , Michael P. Brenner , Alma dal Co

Plant reflectance spectra - the profile of light reflected by leaves across different wavelengths - supply the spectral signature for a species at a spatial location to enable estimation of functional and taxonomic diversity for plants. We…

Applications · Statistics 2021-03-26 Philip A. White , Henry Frye , Michael F. Christensen , Alan E. Gelfand , John A. Silander

We produce examples of codimension one foliations of the Euclidean and hyperbolic planes with bounded geometry which are topologically products, but for which leaves are non-recursively distorted. That is, the function which compares…

Geometric Topology · Mathematics 2007-05-23 Danny Calegari

Collective cell motions underlie structure formation during embryonic development. Tissues exhibit emergent multicellular characteristics such as jamming, rigidity transitions, and glassy dynamics, but there remain questions about how those…

Biological Physics · Physics 2023-12-13 Evan Thomas , Sevan Hopyan

We present a framework for shape matching in computational anatomy allowing users control of the degree to which the matching is diffeomorphic. This control is given as a function defined over the image and parameterises the template…

Image and Video Processing · Electrical Eng. & Systems 2019-05-23 Andreas Bock , Alexis Arnaudon , Colin Cotter

We consider the set of all 2-step recurrences (difference equations) that are given by linear fractional maps. These give birational maps of the plane. We determine the degree growth of these birational maps. We find the all the maps in…

Dynamical Systems · Mathematics 2007-05-23 Eric Bedford , Kyounghee Kim

We present a detailed systematical theoretical analysis of the post-growth processes occurring in nanofractals grown on surface. For this study we developed a method which accounts for the internal dynamics of particles in a fractal. We…

Atomic and Molecular Clusters · Physics 2015-05-18 Veronika V. Dick , Ilia A. Solov'yov , Andrey V. Solov'yov

In this work, a new model for macroscopic plant tissue growth based on dynamical Riemannian geometry is presented. We treat 1D and 2D tissues as continuous, deformable, growing geometries for sizes larger than 1mm. The dynamics of the…

Tissues and Organs · Quantitative Biology 2016-02-05 Julia Pulwicki

The process of morphogenesis, which can be defined as an evolution of the form of an organism, is one of the most intriguing mysteries in the life sciences. It is clear, that gene expression patterns cannot explain the development of the…

Other Quantitative Biology · Quantitative Biology 2013-07-23 Nadya Morozova , Mikhail Shubin

Nutation is an oscillatory movement that plants display during their development. Despite its ubiquity among plants movements, the relation between the observed movement and the underlying biological mechanisms remains unclear. Here we show…

Tissues and Organs · Quantitative Biology 2017-02-08 Renaud Bastien , Yasmine Meroz

The article provides a pedagogical review aimed at graduate students in materials science, physics, and applied mathematics, focusing on recent developments in the subject. Following a brief summary of concepts from complex analysis, the…

Soft Condensed Matter · Physics 2015-06-24 Martin Z. Bazant , Darren Crowdy