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Water activity and its relationship with interactions stabilising lamellar stacks of mixed lipid bilayers in their fluid state are investigated by means of osmotic pressure measurements coupled with small-angle x-ray scattering. The…

Filaments, forming in the context of cosmological structure formation, are not only supposed to host the majority of the baryons at low redshifts in the form of the WHIM, but also to supply forming galaxies at higher redshifts with a…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-04 J. S. Klar , J. P. Mücket

We investigate structural and dynamical properties of a self-propelled filament using coarse-grained Brownian dynamics simulations. A self-propulsion force is applied along the bond vectors, i.e., tangent to the filament and their locations…

Soft Condensed Matter · Physics 2019-02-14 Shalabh K. Anand , Sunil P. Singh

The mechanism of multivalent counterion-induced bundle formation by filamentous actin (F-actin) is studied using a coarse-grained model and molecular dynamics simulation. Real diameter size, helically ordered charge distribution and twist…

Soft Condensed Matter · Physics 2012-03-01 Sarah Mohammadinejad , Ramin Golestanian , Hossein Fazli

It is known from the wave-like motion of microtubules in motility assays that the piconewton forces that motors produce can be sufficient to bend the filaments. In cellular phenomena such as cytosplasmic streaming, molecular motors…

Soft Condensed Matter · Physics 2017-07-11 Gabriele De Canio , Eric Lauga , Raymond E. Goldstein

We search for potential ``birthmarks'' left from the formation of filamentary molecular clouds in the Ophiuchus complex. We use high dynamic-range column density and temperature maps derived from \textit{Herschel}, \textit{Planck}, and…

Astrophysics of Galaxies · Physics 2025-05-21 João Alves , Marco Lombardi , Charles Lada

We study the segregation of motile semiflexible filaments from a background of similar but non-motile filaments. Our Langevin dynamics simulations reveal a wide range of emergent structures governed by filament flexibility and activity,…

Soft Condensed Matter · Physics 2025-12-22 Chitrak Bhowmik , Aparna Baskaran , Sriram Ramaswamy

In various cellular processes, biofilaments like F-actin and F-tubulin are able to exploit chemical energy associated to polymerization to perform mechanical work against an external load. The force-velocity relationship quantitatively…

Statistical Mechanics · Physics 2018-04-04 Alessia Perilli , Carlo Pierleoni , Giovanni Ciccotti , Jean-Paul Ryckaert

The cytoskeleton is an inhomogeneous network of semi-flexible filaments, which are involved in a wide variety of active biological processes. Although the cytoskeletal filaments can be very stiff and embedded in a dense and cross-linked…

Biological Physics · Physics 2019-05-24 Ines Weber , Cécile Appert-Rolland , Grégory Schehr , Ludger Santen

Multi-flagellated bacteria utilize the hydrodynamic interaction between their filamentary tails, known as flagella, to swim and change their swimming direction in low Reynolds number flow. This interaction, referred to as bundling and…

Robotics · Computer Science 2023-07-04 Zhuonan Hao , Sangmin Lim , M. Khalid Jawed

We present a mathematical model of lophotrichous bacteria, motivated by Pseudomonas putida, which swim through fluid by rotating a cluster of multiple flagella extended from near one pole of the cell body. Although the flagella rotate…

Quantitative Methods · Quantitative Biology 2024-08-26 Jeungeun Park , Yongsam Kim , Wanho Lee , Veronika Pfeifer , Valeriia Muraveva , Carsten Beta , Sookkyung Lim

The occurrence of coiled or helical morphologies is common in nature, from plant roots to DNA packaging into viral capsids, as well as in applications such as oil drilling processes. In many examples, chiral structures result from the…

A controlled surface wrinkling pattern has been widely used in diverse applications, such as stretchable electronics, smart windows, and haptics. Here, we focus on hexagonal wrinkling patterns because of their great potentials in realizing…

Soft Condensed Matter · Physics 2021-02-24 Teng Zhang

Cohesive interactions between filamentous molecules have broad implications for a range of biological and synthetic materials. While long-standing theoretical approaches have addressed the problem of inter-filament forces from the limit of…

Soft Condensed Matter · Physics 2015-06-22 Luis Cajamarca , Gregory M. Grason

We study the liquid crystalline phase behavior of a concentrated suspension of helical flagella isolated from {\it Salmonella typhimurium}. Flagella are prepared with different polymorphic states, some of which have a pronounced helical…

Soft Condensed Matter · Physics 2009-11-11 Edward Barry , Zach Hensel , Michael Shribak , Rudolf Oldenbourg , Zvonimir Dogic

We present a simplified theory for semiflexible flagella under the action of a traveling-wave perturbation that emulates the organized active forces generated by molecular motors, capable of inducing beating patterns to the filament. By…

Soft Condensed Matter · Physics 2025-07-16 Fabio Cecconi , Dario Lucente , Andrea Puglisi , Massimiliano Viale

Bolaamphiphilesamphiphilic molecules with polar groups at each of the two ends of a hydrophobic tail with pH-sensitive spontaneous molecular curvaturesendow membranes of extremophiles with an exquisite balance between stability (or…

We use a coarse-grained molecular model to study the self-assembly process of complexes of cationic and neutral lipids with DNA molecules ("lipoplexes") - a promising nonviral carrier of DNA for gene therapy. We identify the resulting…

Soft Condensed Matter · Physics 2011-05-31 Oded Farago , Niels Grønbech-Jensen

We design models for helium in matrices like aerogel, Vycor or Geltech from a manifestly microscopic point of view. For that purpose, we calculate the dynamic structure function of 4He on Si substrates and between two Si walls as a function…

Condensed Matter · Physics 2009-11-10 V. Apaja , E. Krotscheck

We use numerical simulations of turbulent cluster-forming regions to study the nature of dense filamentary structures in star formation. Using four hydrodynamic and magnetohydrodynamic simulations chosen to match observations, we identify…

Astrophysics of Galaxies · Physics 2015-06-23 Helen Kirk , Ralph Pudritz , Mikhail Klassen , Samantha Pillsworth