Related papers: Jamming of semiflexible polymers
The non-equilibrium structural and dynamical properties of semiflexible polymers confined to two dimensions are investigated by molecular dynamics simulations. Three different scenarios are considered: The force-extension relation of…
The mechanical and rheological properties of jammed packings of frictionless particles under shear strain remain not fully understood, even when the strain amplitude is very small and well below the yielding threshold. Systems above the…
The freely jointed chain model with reversible hinges (rFJC) is the simplest theoretical model that captures reversible transitions of the local bending stiffness along the polymer chain backbone, e.g. helix-coil-type of local…
Starting from an unjammed initial state, applying shear to a granular material of a fixed packing fraction below $\phi_J$, i.e. the isotropic jamming density of frictionless spheres can produce shear jamming states, as have been discovered…
We experimentally study the vicinity of the Jamming transition by investigating the statics and the dynamics of the contact network of an horizontally shaken bi-disperse packing of photo-elastic discs. Compressing the packing very slowly,…
We investigate conformations and dynamics of a polymer considering its monomers to be active Brownian particles. This active polymer shows very intriguing physical behavior which is absent in an active Rouse chain. The chain initially…
We have studied how 2- and 3- dimensional systems made up of particles interacting with finite range, repulsive potentials jam (i.e., develop a yield stress in a disordered state) at zero temperature and applied stress. For each…
The properties of semiflexible polymers tethered by one end to an impenetrable wall and exposed to oscillatory shear flow are investigated by mesoscale simulations. A polymer, confined in two dimensions, is described by a linear bead-spring…
We experimentally study the unjamming dynamics of strongly compressed particle rafts confined between two fixed walls and two movable barriers. The back barrier is made of an elastic band, whose deflection indicates the local stress. The…
Motivated in part by the recent observation of liquid glass in suspensions of ellipsoidal colloids, we examine the structure of jammed ellipse packings over a much wider range of particle aspect ratios ($\alpha$) than has been previously…
The conformational properties of flexible and semiflexible polymers exposed to active noise are studied theoretically. The noise may originate from the interaction of the polymer with surround- ing active (Brownian) particles or from the…
We investigate a three-dimensional kinetically-constrained model that exhibits two types of phase transitions at different densities. At the jamming density $ \rho_J $ there is a mixed-order phase transition in which a finite fraction of…
We present a detailed study of the static and dynamic behavior of long semiflexible polymer chains in a melt. Starting from previously obtained fully equilibrated high molecular weight polymer melts [{\it Zhang et al.} ACS Macro Lett. 3,…
Vibrational spectra and normal modes of mechanically stable particle packings in three dimensions are analyzed over a range of compressions, from near the jamming transition, where the packings lose their rigidity, to far above it. At high…
We investigate a stochastic process where a rectangle breaks into smaller rectangles through a series of horizontal and vertical fragmentation events. We focus on the case where both the vertical size and the horizontal size of a rectangle…
The interplay of nematic order and phase separation in solutions of semiflexible polymers in solvents of variable quality is investigated by density functional theory (DFT) and molecular dynamics (MD) simulations. We studied coarse-grained…
Semiflexible polymer models are widely used as a paradigm to understand structural phases in biomolecules including folding of proteins. Since stable knots are not so common in real proteins, the existence of stable knots in semiflexible…
We consider an inextensible, semiflexible polymer or worm-like chain which is confined in the transverse direction by a parabolic potential and subject to a longitudinal force at the ends, so that the polymer is stretched out and…
We elucidate the elastic behavior of a wormlike chain in 3D under compression and provide exact solutions for the experimentally accessible force-extension relation in terms of generalized spheroidal wave functions. In striking contrast to…
There are two main classes of physics-based models for two-dimensional cellular materials: packings of repulsive disks and the vertex model. These models have several disadvantages. For example, disk interactions are typically a function of…