Related papers: A bioinformatics system for searching Co-Occurrenc…
Discourse analysis may seek to characterize not only the overall composition of a given text but also the dynamic patterns within the data. This technical report introduces a data format intended to facilitate multi-level investigations,…
Conventional multimedia annotation/retrieval systems such as Normalized Continuous Relevance Model (NormCRM) [16] require a fully labeled training data for a good performance. Active Learning, by determining an order for labeling the…
Substructure search in chemical compound databases is a fundamental task in cheminformatics with critical implications for fields such as drug discovery, materials science, and toxicology. However, the increasing size and complexity of…
Co-clustering simultaneously clusters rows and columns, revealing more fine-grained groups. However, existing co-clustering methods suffer from poor scalability and cannot handle large-scale data. This paper presents a novel and scalable…
The exponential growth of scientific literature necessitates advanced tools for effective knowledge exploration. We present Knowledge Navigator, a system designed to enhance exploratory search abilities by organizing and structuring the…
Analytical information needs, such as trend analysis and causal impact assessment, are prevalent across various domains including law, finance, science, and much more. However, existing information retrieval paradigms, whether based on…
Across many data domains, co-occurrence statistics about the joint appearance of objects are powerfully informative. By transforming unsupervised learning problems into decompositions of co-occurrence statistics, spectral algorithms provide…
AI models rely on annotated data to learn pattern and perform prediction. Annotation is usually a labor-intensive step that require associating labels ranging from a simple classification label to more complex tasks such as object…
We propose a new methodology for selecting and ranking covariates associated with a variable of interest in a context of high-dimensional data under dependence but few observations. The methodology successively intertwines the clustering of…
The question-answering system for Life science research, which is characterized by the rapid pace of discovery, evolving insights, and complex interactions among knowledge entities, presents unique challenges in maintaining a comprehensive…
Literature-based knowledge discovery process identifies the important but implicit relations among information embedded in published literature. Existing techniques from Information Retrieval and Natural Language Processing attempt to…
The growing volume of scientific literature makes it challenging for scientists to move from a list of papers to a synthesized understanding of a topic. Because of the constant influx of new papers on a daily basis, even if a scientist…
The growing volume of biomedical scholarly document abstracts presents an increasing challenge in efficiently retrieving accurate and relevant information. To address this, we introduce a novel approach that integrates an optimized topic…
Recent advances in text summarization have predominantly leveraged large language models to generate concise summaries. However, language models often do not maintain long-term discourse structure, especially in news articles, where…
Scientific communities naturally tend to organize around data ecosystems created by the combination of their observational devices, their data repositories, and the workflows essential to carry their research from observation to discovery.…
Large Reasoning Models (LRMs) face two fundamental limitations: excessive token consumption when overanalyzing simple information processing tasks, and inability to access up-to-date knowledge beyond their training data. We introduce MARS…
Since the advent of various pre-trained large language models, extracting structured knowledge from scientific text has experienced a revolutionary change compared with traditional machine learning or natural language processing techniques.…
Large language models based Multi Agent Systems (MAS) have demonstrated promising performance for enhancing the efficiency and accuracy of code generation tasks. However,most existing methods follow a conventional sequence of planning,…
Until recently, search engines were the predominant method for people to access online information. The recent emergence of large language models (LLMs) has given machines new capabilities such as the ability to generate new digital…
In recent years, user-generated audio content has proliferated across various media platforms, creating a growing need for efficient retrieval methods that allow users to search for audio clips using natural language queries. This task,…