Related papers: $E$-restricted double traces
In $2013$ a novel self-assembly strategy for polypeptide nanostructure design which could lead to significant developments in biotechnology was presented in [Design of a single-chain polypeptide tetrahedron assembled from coiled-coil…
A novel self-assembly strategy for polypeptide nanostructure design was presented in [Design of a single-chain polypeptide tetrahedron assembled from coiled-coil segments, Nature Chemical Biology 9 (2013) 362--366]. The first mathematical…
Recently designed biomolecular approaches to build single chain polypeptide polyhedra as molecular origami nanostructures have risen high interest in various double traces of the underlying graphs of these polyhedra. Double traces are walks…
A parallel $d$-stable trace is a closed walk which traverses every edge of a graph exactly twice in the same direction and for every vertex $v$, there is no subset $X \subseteq N(v)$ with $1 \leq |N| \leq d$ such that every time the walk…
In a strongly connected graph $G = (V,E)$, a cut arc (also called strong bridge) is an arc $e \in E$ whose removal makes the graph no longer strongly connected. Equivalently, there exist $u,v \in V$, such that all $u$-$v$ walks contain $e$.…
A directed acyclic graph $G=(V,E)$ is said to be $(e,d)$-depth robust if for every subset $S \subseteq V$ of $|S| \leq e$ nodes the graph $G-S$ still contains a directed path of length $d$. If the graph is $(e,d)$-depth-robust for any $e,d$…
We say a hypergraph $\mathcal{H}$ contains a graph $G$ as trace if there exists a vertex subset $S \subseteq V(\mathcal{H})$ such that $|S| = V(G)$ and $\{e \cap S \mid e \in E(\mathcal{H})\}$ contains $G$ as a subgraph. We use…
This paper develops a structural theory of unique shortest paths in real-weighted graphs. Our main goal is to characterize exactly which sets of node sequences, which we call path systems, can be realized as unique shortest paths in a graph…
We say that a vertex $v$ in a connected graph $G$ is decisive if the numbers of walks from $v$ of each length determine the graph $G$ rooted at $v$ up to isomorphism among all connected rooted graphs with the same number of vertices. On the…
Simultaneous Geometric Embedding (SGE) asks whether, for a given collection of graphs on the same vertex set V, there is an embedding of V in the plane that admits a crossing-free drawing with straightline edges for each of the given…
We study a generalization of strongly regular graphs. We call a graph strongly walk-regular if there is an $\ell >1$ such that the number of walks of length $\ell$ from a vertex to another vertex depends only on whether the two vertices are…
Graphs have been widely used in real-world applications, in which investigating relations between vertices is an important task. In this paper, we study the problem of generating the k-hop-constrained s-t simple path graph, i.e., the…
Let $G$ be a graph with vertex set $V(G)$ and edge set $E(G)$. An edge subset $F\subseteq E(G)$ is called a restricted edge-cut if $G-F$ is disconnected and has no isolated vertices. The restricted edge-connectivity $\lambda'(G)$ of $G$ is…
In this paper we introduce a new simple but powerful general technique for the study of edge- and vertex-reinforced processes with super-linear reinforcement, based on the use of order statistics for the number of edge, respectively of…
The simple graphs $G=(V,E)$ that satisfy $|E'|\leq 2|V'|-l$ for any subgraph (and for $l=1,2,3$) are the $(2,l)$-sparse graphs. Those that also satisfy $|E|=2|V|-l$ are the $(2,l)$-tight graphs. These can be characterised by their…
The restricted edge-connectivity of a connected graph $G$, denoted by $\lambda^{\prime}(G)$, if it exists, is the minimum cardinality of a set of edges whose deletion makes $G$ disconnected and each component with at least 2 vertices. It…
A directed graph $G=(V,E)$ is {\it strongly pseudo transitive} if there is a partition $\{A,E-A\}$ of $E$ so that graphs $G_1=(V,A)$ and $G_2=(V,E-A)$ are transitive, and additionally, if $ab\in A$ and $bc\in E $ implies that $ac\in E$. A…
Graph vertex embeddings based on random walks have become increasingly influential in recent years, showing good performance in several tasks as they efficiently transform a graph into a more computationally digestible format while…
We consider the problem of reconstructing an undirected graph $G$ on $n$ vertices given multiple random noisy subgraphs or "traces". Specifically, a trace is generated by sampling each vertex with probability $p_v$, then taking the…
The notion of forbidden-transition graphs allows for a robust generalization of walks in graphs. In a forbidden-transition graph, every pair of edges incident to a common vertex is permitted or forbidden; a walk is compatible if all pairs…