Related papers: Minimum triplet covers of binary phylogenetic $X$-…
The comprehensive characterization of the structure of complex networks is essential to understand the dynamical processes which guide their evolution. The discovery of the scale-free distribution and the small world property of real…
We introduce the graph theoretical parameter of edge treewidth. This parameter occurs in a natural way as the tree-like analogue of cutwidth or, alternatively, as an edge-analogue of treewidth. We study the combinatorial properties of…
A drawing of a given (abstract) tree that is a minimum spanning tree of the vertex set is considered aesthetically pleasing. However, such a drawing can only exist if the tree has maximum degree at most 6. What can be said for trees of…
Motivated by applications to low-rank matrix completion, we give a combinatorial characterization of the independent sets in the algebraic matroid associated to the collection of $m\times n$ rank-2 matrices and $n\times n$ skew-symmetric…
We show that the size of a minimal simplicial cover of a polytope $P$ is a lower bound for the size of a minimal triangulation of $P$, including ones with extra vertices. We then use this fact to study minimal triangulations of cubes, and…
Phylogenetic trees are leaf-labelled trees used to model the evolution of species. Here we explore the practical impact of kernelization (i.e. data reduction) on the NP-hard problem of computing the TBR distance between two unrooted binary…
We present a systematic study of threefolds fibred by K3 surfaces that are mirror to sextic double planes. There are many parallels between this theory and the theory of elliptic surfaces. We show that the geometry of such threefolds is…
In this paper we introduce and study three new measures for efficient discriminative comparison of phylogenetic trees. The NNI navigation dissimilarity $d_{nav}$ counts the steps along a "combing" of the Nearest Neighbor Interchange (NNI)…
In 1995, Koml\'os, S\'ark\"ozy and Szemer\'edi showed that every large $n$-vertex graph with minimum degree at least $(1/2 + \gamma)n$ contains all spanning trees of bounded degree. We consider a generalization of this result to loose…
Large tree structures are ubiquitous and real-world relational datasets often have information associated with nodes (e.g., labels or other attributes) and edges (e.g., weights or distances) that need to be communicated to the viewers. Yet,…
Phylogenetic trees are leaf-labelled trees used to model the evolution of species. In practice it is not uncommon to obtain two topologically distinct trees for the same set of species, and this motivates the use of distance measures to…
A BC-tree (block-cutpoint-tree) is a tree (with at least two vertices) where the distance between any two leaves is even. Motivated from the study of the "core" of a graph, BC-trees provide an interesting class of trees. We consider…
A branch vertex in a tree is a vertex of degree at least three. We prove that, for all $s\geq 1$, every connected graph on $n$ vertices with minimum degree at least $(\frac{1}{s+3}+o(1))n$ contains a spanning tree having at most $s$ branch…
In Francis and Steel (2015), it was shown that there exists non-trivial networks on $4$ leaves upon which the distance metric affords a metric on a tree which is not the base tree of the network. In this paper we extend this result in two…
The minimum height of vertex and edge partition trees are well-studied graph parameters known as, for instance, vertex and edge ranking number. While they are NP-hard to determine in general, linear-time algorithms exist for trees.…
It is known that all but finitely many leaves of a measured foliated 2-complex of thin type are quasi-isometric to an infinite tree with at most two topological ends. We show that if the foliation is cooriented, and the associated R-tree is…
In this paper we present with algebraic trees a novel notion of (continuum) trees which generalizes countable graph-theoretic trees to (potentially) uncountable structures. For that purpose we focus on the tree structure given by the branch…
For stacked simplicial complexes, (special subclasses of such are: trees, triangulations of polygons, stacked polytopes), we give an explicit bijection between partitions of facets (for trees: edges), and partitions of vertices into…
A dual version of a conjecture by Woodall asserts that, in a planar digraph, the length of a shortest dicycle equals the maximum number of pairwise disjoint feedback arc sets. We verify this conjecture for the case where the underlying…
Tree decompositions of graphs are of fundamental importance in structural and algorithmic graph theory. Planar decompositions generalise tree decompositions by allowing an arbitrary planar graph to index the decomposition. We prove that…