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Hidden Markov models (HMMs) have been used increasingly to understand how movement patterns of animals arise from behavioural states. An animal is assumed to transition between behavioural states through time, as described by transition…

Quantitative Methods · Quantitative Biology 2025-10-07 Théo Michelot , Emma Storey

1. Electronic telemetry is frequently used to document animal movement through time. Methods that can identify underlying behaviors driving specific movement patterns can help us understand how and why animals use available space, thereby…

Maritime transportation is central to the global economy, and analyzing its large-scale behavioral data is critical for operational planning, environmental stewardship, and governance. This work presents a spatio-temporal analytical…

1. Spatial memory plays a role in the way animals perceive their environments, resulting in memory-informed movement patterns that are observable to ecologists. Developing mathematical techniques to understand how animals use memory in…

Quantitative Methods · Quantitative Biology 2022-02-17 Peter R. Thompson , Andrew E. Derocher , Mark A. Edwards , Mark A. Lewis

A multi-state version of an animal movement analysis method based on conditional logistic regression, called Step Selection Function (SSF), is proposed. In ecology SSF is developed from a comparison between the observed location of an…

Methodology · Statistics 2018-03-14 Aurélien Nicosia , Thierry Duchesne , Louis-Paul Rivest , Daniel Fortin

Collective animal movement fascinates children and scientists alike. One of the most commonly given explanations for collective animal movement is improved foraging. Animals are hypothesized to gain from searching for food in groups. Here,…

Multiagent Systems · Computer Science 2019-04-08 Ravid Cohen , Yossi Yovel , Dan Halperin

Here we present an approach to identify partners at sea based on fishing track analysis, and describe this behaviour in six different fleets: 1) pelagic pair trawlers, 2) large bottom otter trawlers, 3) small bottom otter trawlers, 4)…

1. Understanding how to find targets with very limited information is a topic of interest in many disciplines. In ecology, such research has often focused on the development of two movement models: i) the L\'evy walk and; ii) the composite…

Quantitative Methods · Quantitative Biology 2015-11-30 Marie Auger-Méthé , Andrew E. Derocher , Michael J. Plank , Edward A. Codling , Mark A. Lewis

Better understanding the natural world is a crucial task with a wide range of applications. In environments with close proximity between humans and animals, such as zoos, it is essential to better understand the causes behind animal…

Hidden Markov models (HMMs) and their extensions have proven to be powerful tools for classification of observations that stem from systems with temporal dependence as they take into account that observations close in time are likely…

Applications · Statistics 2021-11-22 Sofia Ruiz-Suarez , Vianey Leos-Barajas , Juan Manuel Morales

Hidden Markov models are versatile tools for modeling sequential observations, where it is assumed that a hidden state process selects which of finitely many distributions generates any given observation. Specifically for time series of…

Methodology · Statistics 2019-01-11 Timo Adam , Roland Langrock , Christian H. Weiß

Advances in field techniques have lead to an increase in spatially-referenced capture-recapture data to estimate a species' population size as well as other demographic parameters and patterns of space usage. Statistical models for these…

Applications · Statistics 2014-05-09 Brian J. Reich , Beth Gardner

Wild animals are commonly fitted with trackers that record their position through time, and statistical models for tracking data broadly fall into two categories: models focused on small-scale movement decisions, and models for large-scale…

Applications · Statistics 2025-10-07 Théo Michelot , Ephraim M. Hanks

Understanding species-habitat associations is fundamental to ecological sciences and for species conservation. Consequently, various statistical approaches have been designed to infer species-habitat associations. Due to their conceptual…

1. The utilisation distribution describes the relative probability of use of a spatial unit by an animal. It is natural to think of it as the long-term consequence of the animal's short-term movement decisions: it is the accumulation of…

Applications · Statistics 2018-10-25 Théo Michelot , Marie-Pierre Etienne , Pierre Gloaguen

A model of the mechanisms underlying exploratory behaviour, based on empirical research and refined using a computer simulation, is presented. The behaviour of killifish from two lakes, one with killifish predators and one without, was…

Populations and Evolution · Quantitative Biology 2019-07-11 Liane Gabora , Patrick Colgan

Although animal locations gained via GPS, etc. are typically observed on a discrete time scale, movement models formulated in continuous time are preferable in order to avoid the struggles experienced in discrete time when faced with…

Methodology · Statistics 2017-04-05 Alison Parton , Paul G. Blackwell , Anna Skarin

Mechanistic modelling of animal movement is often formulated in discrete time despite problems with scale invariance, such as handling irregularly timed observations. A natural solution is to formulate in continuous time, yet uptake of this…

Applications · Statistics 2017-05-19 Alison Parton , Paul G. Blackwell

The movement of organisms is subject to a multitude of influences of widely varying character: from the bio-mechanics of the individual, over the interaction with the complex environment many animals live in, to evolutionary pressure and…

Biological Physics · Physics 2013-07-18 Friedrich Lenz , Aleksei V. Chechkin , Rainer Klages

While the overarching pattern of biannual avian migration is well understood, there are significant questions pertaining to this phenomenon that invite further study. Necessary to any analysis of these questions is an understanding of how a…

Applications · Statistics 2024-07-04 Michael F. Christensen , Peter D. Hoff