Related papers: LP-branching algorithms based on biased graphs
A biased graph consists of a graph $G$ together with a collection of distinguished cycles of $G$, called balanced cycles, with the property that no theta subgraph contains exactly two balanced cycles. Perhaps the most natural biased graphs…
The Metric Embedding problem takes as input two metric spaces $(X,D_X)$ and $(Y,D_Y)$, and a positive integer $d$. The objective is to determine whether there is an embedding $F:X \rightarrow Y$ such that $d_{F} \leq d$, where $d_{F}$…
In a graph $G = (V,E)$, a vertex subset $S\subseteq V(G)$ is said to be a dominating set of $G$ if every vertex not in $S$ is adjacent to a vertex in $S$. A dominating set $S$ of $G$ is called a paired-dominating set of $G$ if the induced…
In this paper we revisit the classical Edge Disjoint Paths (EDP) problem, where one is given an undirected graph G and a set of terminal pairs P and asks whether G contains a set of pairwise edge-disjoint paths connecting every terminal…
A dominating set of a graph $\mathcal{G=(V, E)}$ is a subset of vertices $S\subseteq\mathcal{V}$ such that every vertex $v\in \mathcal{V} \setminus S$ outside the dominating set is adjacent to a vertex $u\in S$ within the set. The minimum…
The Correlation Clustering problem is one of the most extensively studied clustering formulations due to its wide applications in machine learning, data mining, computational biology and other areas. We consider the Correlation Clustering…
Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…
Finding a maximum clique in a given graph is one of the fundamental NP-hard problems. We compare two multi-core thread-parallel adaptations of a state-of-the-art branch and bound algorithm for the maximum clique problem, and provide a novel…
Finding large cliques or cliques missing a few edges is a fundamental algorithmic task in the study of real-world graphs, with applications in community detection, pattern recognition, and clustering. A number of effective…
The uniqueness of an optimal solution to a combinatorial optimization problem attracts many fields of researchers' attention because it has a wide range of applications, it is related to important classes in computational complexity, and an…
The Longest Path Problem is a question of finding the maximum length between pairs of vertices of a graph. In the general case, the problem is NP-complete. However, there is a small collection of graph classes for which there exists an…
As a fundamental problem in pattern recognition, graph matching has applications in a variety of fields, from computer vision to computational biology. In graph matching, patterns are modeled as graphs and pattern recognition amounts to…
We propose polynomial-time algorithms that sparsify planar and bounded-genus graphs while preserving optimal or near-optimal solutions to Steiner problems. Our main contribution is a polynomial-time algorithm that, given an unweighted graph…
We consider the constrained graph alignment problem which has applications in biological network analysis. Given two input graphs $G_1=(V_1,E_1), G_2=(V_2,E_2)$, a pair of vertex mappings induces an {\it edge conservation} if the vertex…
The maximum modularity of a graph is a parameter widely used to describe the level of clustering or community structure in a network. Determining the maximum modularity of a graph is known to be NP-complete in general, and in practice a…
Given a list of k source-sink pairs in an edge-weighted graph G, the minimum multicut problem consists in selecting a set of edges of minimum total weight in G, such that removing these edges leaves no path from each source to its…
Covering problems are fundamental classical problems in optimization, computer science and complexity theory. Typically an input to these problems is a family of sets over a finite universe and the goal is to cover the elements of the…
In the Directed Long Cycle Hitting Set} problem we are given a directed graph $G$, and the task is to find a set $S$ of at most $k$ vertices/arcs such that $G-S$ has no cycle of length longer than $\ell$. We show that the problem can be…
We present new refinement heuristics for the balanced graph partitioning problem that break with an age-old rule. Traditionally, local search only permits moves that keep the block sizes balanced (below a size constraint). In this work, we…
A classical branch of graph algorithms is graph transversals, where one seeks a minimum-weight subset of nodes in a node-weighted graph $G$ which intersects all copies of subgraphs~$F$ from a fixed family $\mathcal F$. Many such graph…