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Deep R Programming is a comprehensive and in-depth introductory course on one of the most popular languages for data science. It equips ambitious students, professionals, and researchers with the knowledge and skills to become independent…

Programming Languages · Computer Science 2024-08-28 Marek Gagolewski

A generic immersion of a circle into a $2$-sphere is often studied as a projection of a knot; it is called a knot projection. A chord diagram is a configuration of paired points on a circle; traditionally, the two points of each pair are…

Geometric Topology · Mathematics 2021-08-24 Noboru Ito , Yusuke Takimura

The goal of this paper is to discuss the possibility of finding an algorithm that can give all distinct knots up to a desired complexity. Two such algorithms are presented, one based on projections on a plane, the other on closed…

q-alg · Mathematics 2008-02-03 Charilaos Aneziris

In this paper we summarise the work discussed in Ref. [1] and [2] (q-alg/9505003), in which we introduced a method helpful in solving the problem of knot classification. We also present results obtained since then.

q-alg · Mathematics 2008-02-03 Charilaos Aneziris

We introduce OrigamiPlot, an open-source R package and Shiny web application designed to enhance the visualization of multivariate data. This package implements the origami plot, a novel visualization technique proposed by Duan et al. in…

Human-Computer Interaction · Computer Science 2024-11-20 Yiwen Lu , Jiayi Tong , Yuqing Lei , Alex J. Sutton , Haitao Chu , Lisa D. Levine , Thomas Lumley , David A. Asch , Rui Duan , Christopher H. Schmid , Yong Chen

Knitting, an ancient fiber art, creates a structured fabric consisting of loops or stitches. Publishing hand knitting patterns involves lengthy testing periods and numerous knitters. Modeling knitting patterns with graphs can help expedite…

Human-Computer Interaction · Computer Science 2024-06-21 Kathryn Gray , Brian Bell , Stephen Kobourov

gsaot is an R package for Optimal Transport-based global sensitivity analysis. It provides a simple interface for indices estimation using a variety of state-of-the-art Optimal Transport solvers such as the network simplex and…

Computation · Statistics 2025-07-25 Leonardo Chiani , Emanuele Borgonovo , Elmar Plischke , Massimo Tavoni

In the classical knot theory there is a well-known notion of descending diagram. From an arbitrary diagram one can easily obtain, by some crossing changes, a descending diagram which is a diagram of the unknot or unlink. In this paper the…

Geometric Topology · Mathematics 2007-05-23 Maciej Mroczkowski

Background: Current nomogram can only be created for regression algorithm. Providing nomogram for any machine learning (ML) algorithms may accelerate model deployment in clinical settings or improve model availability. We developed an R…

Machine Learning · Computer Science 2025-01-13 Herdiantri Sufriyana , Emily Chia-Yu Su

In \cite{Kim} it is shown that knots in $S_{g} \times S^{1}$ can be presented by virtual diagrams with a decoration, so called, {\em double lines}. In this paper, we study the essential diagram for each knot in $S_{g} \times S^{1}$, which…

Geometric Topology · Mathematics 2025-12-09 Seongjeong Kim

Simulated high-dimensional data is useful for testing, validating, and improving algorithms used in dimension reduction, supervised and unsupervised learning. High-dimensional data is characterized by multiple variables that are dependent…

Correlation among the observations in high-dimensional regression modeling can be a major source of confounding. We present a new open-source package, plmmr, to implement penalized linear mixed models in R. This R package estimates…

Computation · Statistics 2026-05-13 Tabitha K. Peter , Anna C. Reisetter , Yujing Lu , Oscar A. Rysavy , Patrick J. Breheny

Introduced recently, an n-crossing is a singular point in a projection of a link at which n strands cross such that each strand travels straight through the crossing. We introduce the notion of an \"ubercrossing projection, a knot…

I briefly discuss a method of obtaining distinct classes of topologically equivalent knots by developing appropriate computer programs.

q-alg · Mathematics 2008-02-03 Charilaos Aneziris

RTNeural is a neural inferencing library written in C++. RTNeural is designed to be used in systems with hard real-time constraints, with additional emphasis on speed, flexibility, size, and convenience. The motivation and design of the…

Audio and Speech Processing · Electrical Eng. & Systems 2021-06-08 Jatin Chowdhury

Data depth concept offers a variety of powerful and user friendly tools for robust exploration and inference for multivariate socio-economic phenomena. The offered techniques may be successfully used in cases of lack of our knowledge on…

Computation · Statistics 2019-02-20 Daniel Kosiorowski , Zygmunt Zawadzki

This paper provides the complete table of prime knot projections with their mirror images, without redundancy, up to eight double points systematically thorough a finite procedure by flypes. In this paper, we show how to tabulate the knot…

Geometric Topology · Mathematics 2021-08-24 Noboru Ito , Yusuke Takimura

The iotools package provides a set of tools for Input/Output (I/O) intensive datasets processing in R (R Core Team, 2014). Efficent parsing methods are included which minimize copying and avoid the use of intermediate string representations…

Computation · Statistics 2016-04-08 Taylor Arnold , Michael Kane , Simon Urbanek

Package spar for R builds ensembles of predictive generalized linear models with high-dimensional predictors. It employs an algorithm utilizing variable screening and random projection tools to efficiently handle the computational…

Computation · Statistics 2024-11-28 Roman Parzer , Laura Vana-Gür , Peter Filzmoser

iGraphMatch is an R package for finding corresponding vertices between two graphs, also known as graph matching. The package implements three categories of prevalent graph matching algorithms including relaxation-based, percolation-based,…

Computation · Statistics 2021-12-20 Zihuan Qiao , Daniel Sussman