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Most animals possess the ability to actuate a vast diversity of movements, ostensibly constrained only by morphology and physics. In practice, however, a frequent assumption in behavioral science is that most of an animal's activities can…

Quantitative Methods · Quantitative Biology 2014-08-13 Gordon J. Berman , Daniel M. Choi , William Bialek , Joshua W. Shaevitz

Although extensive behavioral changes often exist between closely related animal species, our understanding of the genetic basis underlying the evolution of behavior has remained limited. Here, we propose a new framework to study behavioral…

Populations and Evolution · Quantitative Biology 2020-07-21 Damián G. Hernández , Catalina Rivera , Jessica Cande , Baohua Zhou , David L. Stern , Gordon J. Berman

The ability to capture detailed interactions among individuals in a social group is foundational to our study of animal behavior and neuroscience. Recent advances in deep learning and computer vision are driving rapid progress in methods…

Computer Vision and Pattern Recognition · Computer Science 2022-12-02 Shiting Xiao , Yufu Wang , Ammon Perkes , Bernd Pfrommer , Marc Schmidt , Kostas Daniilidis , Marc Badger

The internal behaviour of a population is an important feature to take account of when modelling their dynamics. In line with kin selection theory, many social species tend to cluster into distinct groups in order to enhance their overall…

Methodology · Statistics 2023-11-02 Blake McGrane-Corrigan , Oliver Mason , Rafael de Andrade Moral

Animal behaviour is complex and the amount of data in the form of video, if extracted, is copious. Manual analysis of behaviour is massively limited by two insurmountable obstacles, the complexity of the behavioural patterns and human bias.…

Computer Vision and Pattern Recognition · Computer Science 2019-10-29 Anthony Bourached , Parashkev Nachev

The explosion of data on animal behavior in more natural contexts highlights the fact that these behaviors exhibit correlations across many time scales. But there are major challenges in analyzing these data: records of behavior in single…

Neurons and Cognition · Quantitative Biology 2024-01-23 William Bialek , Joshua W. Shaevitz

Rapid identification and accurate documentation of interfering and high-risk behaviors in ASD, such as aggression, self-injury, disruption, and restricted repetitive behaviors, are important in daily classroom environments for tracking…

Computer Vision and Pattern Recognition · Computer Science 2024-08-01 Barun Das , Conor Anderson , Tania Villavicencio , Johanna Lantz , Jenny Foster , Theresa Hamlin , Ali Bahrami Rad , Gari D. Clifford , Hyeokhyen Kwon

Numerical models indicate that collective animal behaviour may emerge from simple local rules of interaction among the individuals. However, very little is known about the nature of such interaction, so that models and theories mostly rely…

Populations and Evolution · Quantitative Biology 2009-11-13 M. Ballerini , N. Cabibbo , R. Candelier , A. Cavagna , E. Cisbani , I. Giardina , V. Lecomte , A. Orlandi , G. Parisi , A. Procaccini , M. Viale , V. Zdravkovic

Several studies have investigated human interaction using modern tracking techniques for face-to-face encounters across various settings and age groups. However, little attention has been given to understanding how individual…

Collective phenomena, whereby agent-agent interactions determine spatial patterns, are ubiquitous in the animal kingdom. On the other hand, movement and space use are also greatly influenced by the interactions between animals and their…

Quantitative Methods · Quantitative Biology 2016-03-21 Jonathan R. Potts , Karl Mokross , Mark A. Lewis

The study of social interactions and collective behaviors through multi-agent video analysis is crucial in biology. While self-supervised keypoint discovery has emerged as a promising solution to reduce the need for manual keypoint…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Daniel Khalil , Christina Liu , Pietro Perona , Jennifer J. Sun , Markus Marks

Consider a flock of birds that fly interacting between them. The interactions are modelled through a hierarchical system in which each bird, at each time step, adjusts its own velocity according to his past velocity and a weighted mean of…

Probability · Mathematics 2009-12-24 Federico Dalmao , Ernesto Mordecki

We propose a novel computational method to extract information about interactions among individuals with different behavioral states in a biological collective from ordinary video recordings. Assuming that individuals are acting as finite…

Multiagent Systems · Computer Science 2017-10-03 Hiroki Sayama , Farnaz Zamani Esfahlani , Ali Jazayeri , J. Scott Turner

We quantify nonlinear interactions between coupled complex processes, when the system is subject to noise and not all its components are measurable. Our method is applicable even when the system cannot be continuously monitored over time,…

Statistical Mechanics · Physics 2026-04-02 Erez Aghion , Nava Leibovich

Interaction mechanism in the acoustic communication of actual animals is investigated by combining mathematical modeling and empirical data. Here we use a deterministic mathematical model (a phase oscillator model) to describe the…

Adaptation and Self-Organizing Systems · Physics 2019-07-29 Kaiichiro Ota , Ikkyu Aihara , Toshio Aoyagi

Even the simplest of animals exhibit behavioral sequences with complex temporal dynamics. Prominent amongst the proposed organizing principles for these dynamics has been the idea of a hierarchy, wherein the movements an animal makes can be…

Biological Physics · Physics 2017-02-08 Gordon J. Berman , William Bialek , Joshua W. Shaevitz

Reliable markerless motion tracking of people participating in a complex group activity from multiple moving cameras is challenging due to frequent occlusions, strong viewpoint and appearance variations, and asynchronous video streams. To…

Computer Vision and Pattern Recognition · Computer Science 2020-04-21 Minh Vo , Ersin Yumer , Kalyan Sunkavalli , Sunil Hadap , Yaser Sheikh , Srinivasa Narasimhan

Scientists have developed hundreds of techniques to measure the interactions between pairs of processes in complex systems. But these computational methods, from correlation coefficients to causal inference, rely on distinct quantitative…

Data Analysis, Statistics and Probability · Physics 2023-06-27 Oliver M. Cliff , Annie G. Bryant , Joseph T. Lizier , Naotsugu Tsuchiya , Ben D. Fulcher

Several models of flocking have been promoted based on simulations with qualitatively naturalistic behavior. In this paper we provide the first direct application of computational modeling methods to infer flocking behavior from…

Other Quantitative Biology · Quantitative Biology 2015-05-30 Graciano Dieck Kattas , Xiao-Ke Xu , Michael Small

Activity recognition and, more generally, behavior inference tasks are gaining a lot of interest. Much of it is work in the context of human behavior. New available tracking technologies for wild animals are generating datasets that…

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