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The Micropublications semantic model for scientific claims, evidence, argumentation and annotation in biomedical publications, is a metadata model of scientific argumentation, designed to support several key requirements for exchange and…

Digital Libraries · Computer Science 2014-02-04 Tim Clark , Paolo N. Ciccarese , Carole A. Goble

This paper presents a new selection-based question answering dataset, SelQA. The dataset consists of questions generated through crowdsourcing and sentence length answers that are drawn from the ten most prevalent topics in the English…

Computation and Language · Computer Science 2016-10-31 Tomasz Jurczyk , Michael Zhai , Jinho D. Choi

This paper addresses the problem of determining the best answer in Community-based Question Answering (CQA) websites by focussing on the content. In particular, we present a system, ACQUA [http://acqua.kmi.open.ac.uk], that can be installed…

Computation and Language · Computer Science 2015-06-18 George Gkotsis , Maria Liakata , Carlos Pedrinaci , John Domingue

We introduce an automatic system that achieves state-of-the-art results on the Winograd Schema Challenge (WSC), a common sense reasoning task that requires diverse, complex forms of inference and knowledge. Our method uses a knowledge…

Computation and Language · Computer Science 2018-10-03 Ali Emami , Noelia De La Cruz , Adam Trischler , Kaheer Suleman , Jackie Chi Kit Cheung

Seeking answers to questions within long scientific research articles is a crucial area of study that aids readers in quickly addressing their inquiries. However, existing question-answering (QA) datasets based on scientific papers are…

Computation and Language · Computer Science 2025-01-14 Shraman Pramanick , Rama Chellappa , Subhashini Venugopalan

End users of recent biomedical information systems are often unaware of the storage structure and access mechanisms of the underlying data sources and can require simplified mechanisms for writing domain specific complex queries. This…

Databases · Computer Science 2008-12-16 Kamran Munir , Mohammed Odeh , Richard McClatchey

Prior work in standardized science exams requires support from large text corpus, such as targeted science corpus fromWikipedia or SimpleWikipedia. However, retrieving knowledge from the large corpus is time-consuming and questions embedded…

Artificial Intelligence · Computer Science 2020-04-28 Xinyue Zheng , Peng Wang , Qigang Wang , Zhongchao Shi

There is a large number of online documents data sources available nowadays. The lack of structure and the differences between formats are the main difficulties to automatically extract information from them, which also has a negative…

Biomedical Question Answering aims to obtain an answer to the given question from the biomedical domain. Due to its high requirement of biomedical domain knowledge, it is difficult for the model to learn domain knowledge from limited…

Computation and Language · Computer Science 2022-06-29 Yuxuan Lu , Jingya Yan , Zhixuan Qi , Zhongzheng Ge , Yongping Du

Image based biomarker discovery typically requires an accurate segmentation of histologic structures (e.g., cell nuclei, tubules, epithelial regions) in digital pathology Whole Slide Images (WSI). Unfortunately, annotating each structure of…

Image and Video Processing · Electrical Eng. & Systems 2021-01-07 Runtian Miao , Robert Toth , Yu Zhou , Anant Madabhushi , Andrew Janowczyk

It is now well-admitted that formal methods are helpful for many issues raised in the Web service area. In this paper we present a framework for the design and verification of WSs using process algebras and their tools. We define a two-way…

Artificial Intelligence · Computer Science 2007-05-23 Andrea Ferrara

Humans gather information by engaging in conversations involving a series of interconnected questions and answers. For machines to assist in information gathering, it is therefore essential to enable them to answer conversational questions.…

Computation and Language · Computer Science 2019-04-02 Siva Reddy , Danqi Chen , Christopher D. Manning

This paper presents the formal release of MedMentions, a new manually annotated resource for the recognition of biomedical concepts. What distinguishes MedMentions from other annotated biomedical corpora is its size (over 4,000 abstracts…

Computation and Language · Computer Science 2019-02-26 Sunil Mohan , Donghui Li

Web services substitution is one of the most challenging tasks for automating the composition process of multiple Web services. It aims to improve performances and to deal efficiently with Web services failures. Many existing solutions have…

Software Engineering · Computer Science 2013-05-02 Chantal Cherifi

We propose a novel method for exploiting the semantic structure of text to answer multiple-choice questions. The approach is especially suitable for domains that require reasoning over a diverse set of linguistic constructs but have limited…

Computation and Language · Computer Science 2019-06-11 Daniel Khashabi , Tushar Khot , Ashish Sabharwal , Dan Roth

Objective: Recent advances in language models have shown potential to adapt professional-facing biomedical literature to plain language, making it accessible to patients and caregivers. However, their unpredictability, combined with the…

Computation and Language · Computer Science 2025-07-23 Brian Ondov , William Xia , Kush Attal , Ishita Unde , Jerry He , Dina Demner-Fushman

We introduce VerifAI, an open-source expert system for biomedical question answering that integrates retrieval-augmented generation (RAG) with a novel post-hoc claim verification mechanism. Unlike standard RAG systems, VerifAI ensures…

Information Retrieval · Computer Science 2026-04-13 Miloš Košprdić , Adela Ljajić , Bojana Bašaragin , Darija Medvecki , Lorenzo Cassano , Nikola Milošević

We study a new problem setting of question answering (QA), referred to as DocTabQA. Within this setting, given a long document, the goal is to respond to questions by organizing the answers into structured tables derived directly from the…

Computation and Language · Computer Science 2024-08-22 Haochen Wang , Kai Hu , Haoyu Dong , Liangcai Gao

We describe an investigation of the use of probabilistic models and cost-benefit analyses to guide resource-intensive procedures used by a Web-based question answering system. We first provide an overview of research on question-answering…

Information Retrieval · Computer Science 2012-12-12 David Azari , Eric J. Horvitz , Susan Dumais , Eric Brill

Question answering (QA) systems for large document collections typically use pipelines that (i) retrieve possibly relevant documents, (ii) re-rank them, (iii) rank paragraphs or other snippets of the top-ranked documents, and (iv) select…

Information Retrieval · Computer Science 2021-06-17 Dimitris Pappas , Ion Androutsopoulos
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